Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR036C
Length:
643
Number of sequences:
5887
Description:
YKR036C CAF4 SGDID:S000001744, Chr XI from 510633-508702, Genome Release 64-1-1, reverse complement, Verified ORF, "WD40 repeat-containing protein associated with the CCR4-NOT complex, interacts in a Ccr4p-dependent manner with Ssn2p; also interacts with Fis1p, Mdv1p and Dnm1p and plays a role in mitochondrial fission"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
451O45040    340   GBB1_HOMAM Guanine nucleotide-binding protein...701.4     35.4     33     50
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
452Q5ZMA2    505   PRP19_CHICK Pre-mRNA-processing factor 19 OS=...765.1     33.9     32     57GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
453Q6H8D5    910   COB22_ORYSJ Coatomer subunit beta'-2 OS=Oryza...1390.0003     47.8     27     39GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
454Q9DC48    579   PRP17_MOUSE Pre-mRNA-processing factor 17 OS=...1474.5     33.9     26     43GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
455Q16K15    326   EIF3I_AEDAE Eukaryotic translation initiation...1960.46     37     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
456Q91WM3    475   U3IP2_MOUSE U3 small nucleolar RNA-interactin...3620.09     39.3     22     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
457Q6P5M2    305   WDR61_DANRE WD repeat-containing protein 61 O...1350.53     36.6     23     45GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
458Q6NX08    422   WDR12_DANRE Ribosome biogenesis protein wdr12...400.34     37.4     38     65GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
459Q2UGU1    455   LIS1_ASPOR Nuclear distribution protein nudF ...2880.0000002     57.8     23     38GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
460B8N9H4    455   LIS1_ASPFN Nuclear distribution protein nudF ...2880.0000002     57.8     23     38GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
461B4JPT9    419   WDR12_DROGR Ribosome biogenesis protein WDR12...491.1     35.8     27     59GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
462C6L7U1    1485   LIN1_LOTJA Putative E3 ubiquitin-protein liga...1000.0000002     58.2     32     53GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0009877; P:nodulation; IEA:UniProtKB-KW.
463Q39836    325   GBLP_SOYBN Guanine nucleotide-binding protein...2360.00002     50.4     25     42
464O13168    535   TLE1_DANRE Protein groucho-1 OS=Danio rerio (...700.077     39.7     31     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
465B4KKN1    419   WDR12_DROMO Ribosome biogenesis protein WDR12...495.3     33.5     24     57GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
466C6HTE8    456   LIS1_AJECH Nuclear distribution protein PAC1 ...2920.0000004     56.6     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
467C0NRC6    456   LIS1_AJECG Nuclear distribution protein PAC1 ...2920.0000004     56.6     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
468Q3SZK1    434   AAMP_BOVIN Angio-associated migratory cell pr...1344.5     33.9     23     41GO:0009986; C:cell surface; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0001525; P:angiogenesis; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0045766; P:positive regulation of angiogenesis; NAS:UniProtKB.::GO:0010595; P:positive regulation of endothelial cell migration; IMP:UniProtKB.::GO:0014909; P:smooth muscle cell migration; ISS:UniProtKB.
469P54311    340   GBB1_RAT Guanine nucleotide-binding protein G...2500.00002     50.4     24     43GO:0005834; C:heterotrimeric G-protein complex; TAS:RGD.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0010659; P:cardiac muscle cell apoptotic process; IDA:MGI.::GO:0071456; P:cellular response to hypoxia; IDA:MGI.::GO:0007204; P:elevation of cytosolic calcium ion concentration; IMP:RGD.
470P62874    340   GBB1_MOUSE Guanine nucleotide-binding protein...2500.00002     50.4     24     43GO:0005834; C:heterotrimeric G-protein complex; IPI:MGI.::GO:0001750; C:photoreceptor outer segment; IDA:MGI.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007200; P:activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger; IDA:MGI.::GO:0008283; P:cell proliferation; IDA:MGI.::GO:0060041; P:retina development in camera-type eye; IMP:MGI.::GO:0050909; P:sensory perception of taste; IDA:MGI.
471P62873    340   GBB1_HUMAN Guanine nucleotide-binding protein...2500.00002     50.4     24     43GO:0005834; C:heterotrimeric G-protein complex; IDA:MGI.::GO:0005624; C:membrane fraction; ISS:BHF-UCL.
GO:0003924; F:GTPase activity; IDA:MGI.::GO:0051020; F:GTPase binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007191; P:activation of adenylate cyclase activity by dopamine receptor signaling pathway; ISS:BHF-UCL.::GO:0071870; P:cellular response to catecholamine stimulus; ISS:BHF-UCL.::GO:0071377; P:cellular response to glucagon stimulus; TAS:Reactome.::GO:0071380; P:cellular response to prostaglandin E stimulus; ISS:BHF-UCL.::GO:0006112; P:energy reserve metabolic process; TAS:Reactome.::GO:0007213; P:G-protein coupled acetylcholine receptor signaling pathway; TAS:ProtInc.::GO:0030168; P:platelet activation; TAS:Reactome.::GO:0007265; P:Ras protein signal transduction; TAS:ProtInc.::GO:0007268; P:synaptic transmission; TAS:Reactome.
472P62872    340   GBB1_CANFA Guanine nucleotide-binding protein...2500.00002     50.4     24     43
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
473P62871    340   GBB1_BOVIN Guanine nucleotide-binding protein...2500.00002     50.4     24     43GO:0005834; C:heterotrimeric G-protein complex; IDA:BHF-UCL.::GO:0005624; C:membrane fraction; IDA:BHF-UCL.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007191; P:activation of adenylate cyclase activity by dopamine receptor signaling pathway; IDA:BHF-UCL.::GO:0071870; P:cellular response to catecholamine stimulus; IDA:BHF-UCL.::GO:0071380; P:cellular response to prostaglandin E stimulus; IDA:BHF-UCL.
474Q9FE91    419   C3H62_ARATH Zinc finger CCCH domain-containin...3500.00005     49.7     20     38
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
475Q5R5W8    340   GBB1_PONAB Guanine nucleotide-binding protein...2500.00003     50.4     24     43
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
476P0CS32    341   EIF3I_CRYNJ Eukaryotic translation initiation...1550.14     38.5     22     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
477P0CS33    341   EIF3I_CRYNB Eukaryotic translation initiation...1550.14     38.5     22     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
478P16371    730   GROU_DROME Protein groucho OS=Drosophila mela...700.011     42.7     33     51GO:0005634; C:nucleus; TAS:FlyBase.::GO:0043234; C:protein complex; IPI:FlyBase.
GO:0071906; F:CRD domain binding; IPI:UniProtKB.::GO:0071837; F:HMG box domain binding; IPI:UniProtKB.::GO:0070491; F:repressing transcription factor binding; IGI:FlyBase.::GO:0001106; F:RNA polymerase II transcription corepressor activity; IGI:FlyBase.
GO:0007015; P:actin filament organization; IMP:FlyBase.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0045879; P:negative regulation of smoothened signaling pathway; IMP:FlyBase.::GO:0007541; P:sex determination, primary response to X:A ratio; TAS:FlyBase.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
479A2AHJ4    1799   BRWD3_MOUSE Bromodomain and WD repeat-contain...1734.2     34.3     22     38
GO:0007010; P:cytoskeleton organization; ISS:UniProtKB.::GO:0008360; P:regulation of cell shape; ISS:UniProtKB.
480O60508    579   PRP17_HUMAN Pre-mRNA-processing factor 17 OS=...1813.9     34.3     25     41GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.
481Q6RI45    1802   BRWD3_HUMAN Bromodomain and WD repeat-contain...1733.6     34.7     20     39
GO:0007010; P:cytoskeleton organization; IMP:UniProtKB.::GO:0008360; P:regulation of cell shape; IMP:UniProtKB.
records
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