Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR036C
Length:
643
Number of sequences:
5887
Description:
YKR036C CAF4 SGDID:S000001744, Chr XI from 510633-508702, Genome Release 64-1-1, reverse complement, Verified ORF, "WD40 repeat-containing protein associated with the CCR4-NOT complex, interacts in a Ccr4p-dependent manner with Ssn2p; also interacts with Fis1p, Mdv1p and Dnm1p and plays a role in mitochondrial fission"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
271Q5GIS3    341   GBB_PINFU Guanine nucleotide-binding protein ...2520.000003     53.5     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
272Q9QXE7    527   TBL1X_MOUSE F-box-like/WD repeat-containing p...2650.00004     50.4     22     38GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:MGI.::GO:0003714; F:transcription corepressor activity; IMP:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.
GO:0045444; P:fat cell differentiation; IMP:MGI.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:MGI.::GO:0043627; P:response to estrogen stimulus; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
273A9V790    410   LIS1_MONBE Lissencephaly-1 homolog OS=Monosig...1180.059     40     25     46GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
274Q5RFF8    485   NLE1_PONAB Notchless protein homolog 1 OS=Pon...751.5     35.4     31     52GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
275Q55563    1693   Y163_SYNY3 Uncharacterized WD repeat-containi...1020.0005     47     28     50
GO:0005488; F:binding; IEA:InterPro.
276Q9NSI6    2320   BRWD1_HUMAN Bromodomain and WD repeat-contain...1670.077     40     23     38GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0007010; P:cytoskeleton organization; IMP:UniProtKB.::GO:0008360; P:regulation of cell shape; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
277Q12417    451   PRP46_YEAST Pre-mRNA-splicing factor PRP46 OS...3110.0000000006     65.5     26     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
278O61585    690   KTNB1_STRPU Katanin p80 WD40-containing subun...2580.0000001     58.5     22     38GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
279Q6P4J8    513   SMU1_XENTR WD40 repeat-containing protein SMU...833.3     34.3     27     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
280P54313    340   GBB2_RAT Guanine nucleotide-binding protein G...2520.0000003     56.2     23     44GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.::GO:0043234; C:protein complex; IDA:RGD.
GO:0005246; F:calcium channel regulator activity; IMP:RGD.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
281P62880    340   GBB2_MOUSE Guanine nucleotide-binding protein...2520.0000003     56.2     23     44GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:MGI.
282P62879    340   GBB2_HUMAN Guanine nucleotide-binding protein...2520.0000003     56.2     23     44GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB.::GO:0005886; C:plasma membrane; TAS:Reactome.
GO:0003924; F:GTPase activity; TAS:ProtInc.::GO:0051020; F:GTPase binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071377; P:cellular response to glucagon stimulus; TAS:Reactome.::GO:0006112; P:energy reserve metabolic process; TAS:Reactome.::GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:ProtInc.::GO:0007268; P:synaptic transmission; TAS:Reactome.
283P11017    340   GBB2_BOVIN Guanine nucleotide-binding protein...2520.0000003     56.2     23     44GO:0005834; C:heterotrimeric G-protein complex; IDA:MGI.::GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0003924; F:GTPase activity; IDA:MGI.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
284Q23256    501   YH92_CAEEL Uncharacterized WD repeat-containi...2150.0000009     55.5     23     40
285D5GBI7    452   LIS1_TUBMM Nuclear distribution protein PAC1 ...3130.0000000007     65.1     23     38GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
286Q5RAC9    607   A16L1_PONAB Autophagy-related protein 16-1 OS...2920.0000000008     65.5     24     42GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
287B0X2V9    670   WDR48_CULQU WD repeat-containing protein 48 h...2110.13     38.9     21     40
288Q8IZU2    1322   WDR17_HUMAN WD repeat-containing protein 17 O...2210.39     37.7     24     40
289Q9NVX2    485   NLE1_HUMAN Notchless protein homolog 1 OS=Hom...2390.52     37     20     36GO:0005730; C:nucleolus; IDA:HPA.
290Q9VU65    391   POC1_DROME POC1 centriolar protein homolog OS...653.6     34.3     31     43
GO:0051297; P:centrosome organization; IMP:FlyBase.
291Q8JZX3    405   POC1A_MOUSE POC1 centriolar protein homolog A...3110.00009     48.9     21     36GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.
292Q9C2I5    487   YTM1_NEUCR Ribosome biogenesis protein ytm-1 ...984.5     33.9     23     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
293Q17N69    409   LIS1_AEDAE Lissencephaly-1 homolog OS=Aedes a...2540.000000002     63.5     23     43GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
294Q1HPW4    329   EIF3I_BOMMO Eukaryotic translation initiation...772.5     34.7     30     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
295P0CS49    473   PRP46_CRYNB Pre-mRNA-splicing factor PRP46 OS...1530.068     39.7     27     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
296P74442    1191   Y143_SYNY3 Uncharacterized WD repeat-containi...772.1     35.4     23     51
297P83774    317   GBLP_CANAL Guanine nucleotide-binding protein...2520.000006     52.4     21     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005625; C:soluble fraction; IDA:CGD.
GO:0007155; P:cell adhesion; IMP:CGD.::GO:0030448; P:hyphal growth; IMP:CGD.::GO:0001403; P:invasive growth in response to glucose limitation; IMP:CGD.::GO:0009405; P:pathogenesis; IMP:CGD.
298Q5I0B9    622   ATG16_XENTR Autophagy-related protein 16 OS=X...2180.0001     48.9     21     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
299P25382    515   NLE1_YEAST Ribosome assembly protein 4 OS=Sac...1240.002     44.7     28     48GO:0005730; C:nucleolus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.
300P61480    423   WDR12_RAT Ribosome biogenesis protein WDR12 O...1219.3     32.7     26     44GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
301Q08706    341   GBB_LYMST Guanine nucleotide-binding protein ...2520.0002     47.8     23     42
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
records
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