Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR029C
Length:
751
Number of sequences:
5887
Description:
YKR029C SET3 SGDID:S000001737, Chr XI from 499833-497578, Genome Release 64-1-1, reverse complement, Verified ORF, "Defining member of the SET3 histone deacetylase complex which is a meiosis-specific repressor of sporulation genes; necessary for efficient transcription by RNAPII; one of two yeast proteins that contains both SET and PHD domains"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P36124    751   SET3_YEAST SET domain-containing protein 3 OS...7510     1556     100     100GO:0070210; C:Rpd3L-Expanded complex; IDA:SGD.::GO:0034967; C:Set3 complex; IDA:SGD.
GO:0035064; F:methylated histone residue binding; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016575; P:histone deacetylation; IDA:SGD.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0045835; P:negative regulation of meiosis; IMP:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
2P42948    560   SET4_YEAST SET domain-containing protein 4 OS...4374e-70     246     34     54
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
3Q10362    859   SET3_SCHPO SET domain-containing protein 3 OS...4361e-33     142     25     43GO:0070210; C:Rpd3L-Expanded complex; IDA:PomBase.::GO:0034967; C:Set3 complex; IDA:PomBase.
GO:0018024; F:histone-lysine N-methyltransferase activity; TAS:PomBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
4Q9NR48    2969   ASH1L_HUMAN Histone-lysine N-methyltransferas...930.00000000008     69.7     39     51GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.::GO:0005923; C:tight junction; TAS:ProtInc.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007267; P:cell-cell signaling; TAS:ProtInc.::GO:0006323; P:DNA packaging; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
5Q3UG20    1868   MLL5_MOUSE Histone-lysine N-methyltransferase...820.18     39.3     28     50GO:0070688; C:MLL5-L complex; ISS:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0042800; F:histone methyltransferase activity (H3-K4 specific); ISS:UniProtKB.::GO:0003713; F:transcription coactivator activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007050; P:cell cycle arrest; IEA:UniProtKB-KW.::GO:0071300; P:cellular response to retinoic acid; ISS:BHF-UCL.::GO:0006306; P:DNA methylation; IMP:UniProtKB.::GO:0030218; P:erythrocyte differentiation; IMP:UniProtKB.::GO:0042119; P:neutrophil activation; IMP:UniProtKB.::GO:0002446; P:neutrophil mediated immunity; IMP:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0048384; P:retinoic acid receptor signaling pathway; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6Q8IZD2    1858   MLL5_HUMAN Histone-lysine N-methyltransferase...820.12     39.7     29     49GO:0070688; C:MLL5-L complex; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0019899; F:enzyme binding; IPI:UniProtKB.::GO:0042800; F:histone methyltransferase activity (H3-K4 specific); IDA:UniProtKB.::GO:0003713; F:transcription coactivator activity; IMP:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007050; P:cell cycle arrest; IEA:UniProtKB-KW.::GO:0071300; P:cellular response to retinoic acid; IDA:BHF-UCL.::GO:0006306; P:DNA methylation; ISS:UniProtKB.::GO:0030218; P:erythrocyte differentiation; ISS:UniProtKB.::GO:0042119; P:neutrophil activation; ISS:UniProtKB.::GO:0002446; P:neutrophil mediated immunity; ISS:UniProtKB.::GO:0030854; P:positive regulation of granulocyte differentiation; IMP:BHF-UCL.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0048384; P:retinoic acid receptor signaling pathway; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
7Q99MY8    2958   ASH1L_MOUSE Histone-lysine N-methyltransferas...930.0000000004     67.4     38     51GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005923; C:tight junction; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
8Q9VW15    2226   ASH1_DROME Histone-lysine N-methyltransferase...1270.23     38.9     28     41GO:0005634; C:nucleus; IC:FlyBase.::GO:0035327; C:transcriptionally active chromatin; IMP:FlyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0042800; F:histone methyltransferase activity (H3-K4 specific); IDA:FlyBase.::GO:0046974; F:histone methyltransferase activity (H3-K9 specific); NAS:FlyBase.::GO:0042799; F:histone methyltransferase activity (H4-K20 specific); NAS:FlyBase.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0003727; F:single-stranded RNA binding; IDA:FlyBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0048096; P:chromatin-mediated maintenance of transcription; IMP:FlyBase.::GO:0001700; P:embryonic development via the syncytial blastoderm; IMP:FlyBase.::GO:0048477; P:oogenesis; IMP:FlyBase.::GO:0018991; P:oviposition; IMP:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9Q4V9H5    1015   P20L1_RAT PHD finger protein 20-like protein ...670.00000002     61.6     37     63
GO:0008270; F:zinc ion binding; IEA:InterPro.
10Q8CCJ9    1013   P20L1_MOUSE PHD finger protein 20-like protei...500.00000004     60.8     44     72
GO:0008270; F:zinc ion binding; IEA:InterPro.
11A8MW92    1017   P20L1_HUMAN PHD finger protein 20-like protei...500.00000006     60.1     42     72
GO:0008270; F:zinc ion binding; IEA:InterPro.
12Q08923    506   CTI6_YEAST Histone deacetylase complex subuni...490.0000003     57     49     53GO:0033698; C:Rpd3L complex; IDA:SGD.::GO:0070210; C:Rpd3L-Expanded complex; IDA:SGD.
GO:0035064; F:methylated histone residue binding; IDA:SGD.::GO:0008134; F:transcription factor binding; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0061188; P:negative regulation of chromatin silencing at rDNA; IMP:SGD.::GO:0061186; P:negative regulation of chromatin silencing at silent mating-type cassette; IMP:SGD.::GO:0031939; P:negative regulation of chromatin silencing at telomere; IMP:SGD.::GO:0030174; P:regulation of DNA-dependent DNA replication initiation; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
13Q1MTR4    424   CTI6_SCHPO Putative histone deacetylase compl...890.000001     55.1     33     44GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0070210; C:Rpd3L-Expanded complex; IDA:PomBase.::GO:0032221; C:Rpd3S complex; IDA:PomBase.
GO:0008134; F:transcription factor binding; ISS:PomBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006338; P:chromatin remodeling; NAS:PomBase.::GO:0016575; P:histone deacetylation; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; NAS:PomBase.
14Q9Y7V2    721   BYE1_SCHPO Transcription factor bye1 OS=Schiz...550.000002     55.1     40     56GO:0005634; C:nucleus; IDA:PomBase.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0034244; P:negative regulation of transcription elongation from RNA polymerase II promoter; ISS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
15Q9BVI0    1012   PHF20_HUMAN PHD finger protein 20 OS=Homo sap...530.000002     55.1     38     62GO:0000123; C:histone acetyltransferase complex; IDA:UniProtKB.::GO:0071339; C:MLL1 complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043984; P:histone H4-K16 acetylation; IDA:UniProtKB.::GO:0043981; P:histone H4-K5 acetylation; IDA:UniProtKB.::GO:0043982; P:histone H4-K8 acetylation; IDA:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
16Q8BLG0    1010   PHF20_MOUSE PHD finger protein 20 OS=Mus musc...530.000002     55.1     38     62GO:0000123; C:histone acetyltransferase complex; ISS:UniProtKB.::GO:0071339; C:MLL1 complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043984; P:histone H4-K16 acetylation; ISS:UniProtKB.::GO:0043981; P:histone H4-K5 acetylation; ISS:UniProtKB.::GO:0043982; P:histone H4-K8 acetylation; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
17Q7X6Y7    704   MMD1_ARATH PHD finger protein MALE MEIOCYTE D...510.00006     50.1     43     55GO:0005634; C:nucleus; IDA:TAIR.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007060; P:male meiosis chromosome segregation; IMP:UniProtKB.::GO:0048235; P:pollen sperm cell differentiation; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
18Q8C9B9    2256   DIDO1_MOUSE Death-inducer obliterator 1 OS=Mu...650.00008     50.1     34     51GO:0005737; C:cytoplasm; TAS:MGI.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
19A5DDB7    752   BYE1_PICGU Transcription factor BYE1 OS=1539 ...380.0001     49.7     45     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
20Q6C0K9    822   BYE1_YARLI Transcription factor BYE1 OS=lipol...530.0001     49.7     36     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
21A6ZZW1    594   BYE1_YEAS7 Transcription factor BYE1 OS=Sacch...980.0001     48.9     30     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
22Q6IQX0    1503   KD5BB_DANRE Lysine-specific demethylase 5B-B ...380.0004     47.8     47     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0034648; F:histone demethylase activity (H3-dimethyl-K4 specific); ISS:UniProtKB.::GO:0034647; F:histone demethylase activity (H3-trimethyl-K4 specific); ISS:UniProtKB.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
23Q9ZUA9    697   Y2181_ARATH PHD finger protein At2g01810 OS=A...510.0004     47.4     39     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
24P36106    594   BYE1_YEAST Transcription factor BYE1 OS=Sacch...980.0006     46.6     29     47GO:0005634; C:nucleus; IC:SGD.
GO:0035064; F:methylated histone residue binding; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
25Q9BTC0    2240   DIDO1_HUMAN Death-inducer obliterator 1 OS=Ho...650.0007     47     34     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
26Q24742    3828   TRX_DROVI Histone-lysine N-methyltransferase ...563.5     35     30     52GO:0035097; C:histone methyltransferase complex; IEA:InterPro.
GO:0042800; F:histone methyltransferase activity (H3-K4 specific); IEA:InterPro.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
27Q9FMS5    672   MS1_ARATH PHD finger protein MALE STERILITY 1...560.002     45.1     34     50GO:0005634; C:nucleus; IDA:TAIR.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0071367; P:cellular response to brassinosteroid stimulus; IEP:UniProtKB.::GO:0055046; P:microgametogenesis; IMP:TAIR.::GO:0009846; P:pollen germination; IMP:TAIR.::GO:0010208; P:pollen wall assembly; IMP:TAIR.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0048655; P:tapetal layer morphogenesis; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
28Q6BNY5    682   BYE1_DEBHA Transcription factor BYE1 OS=0083 ...390.004     44.3     41     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
29P20659    3726   TRX_DROME Histone-lysine N-methyltransferase ...1310.004     44.7     28     43GO:0035097; C:histone methyltransferase complex; IDA:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0005700; C:polytene chromosome; IDA:FlyBase.::GO:0008023; C:transcription elongation factor complex; IPI:FlyBase.
GO:0003682; F:chromatin binding; IDA:FlyBase.::GO:0042800; F:histone methyltransferase activity (H3-K4 specific); IEA:InterPro.::GO:0042803; F:protein homodimerization activity; IDA:UniProtKB.::GO:0008157; F:protein phosphatase 1 binding; IPI:FlyBase.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007411; P:axon guidance; IMP:FlyBase.::GO:0008354; P:germ cell migration; IMP:FlyBase.::GO:0043966; P:histone H3 acetylation; IMP:FlyBase.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
30Q9C810    697   Y1342_ARATH PHD finger protein At1g33420 OS=A...470.005     43.9     38     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
31Q5AW75    1407   JHD1_EMENI JmjC domain-containing histone dem...690.006     43.9     29     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051864; F:histone demethylase activity (H3-K36 specific); IEA:EC.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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