Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR029C
Length:
751
Number of sequences:
5887
Description:
YKR029C SET3 SGDID:S000001737, Chr XI from 499833-497578, Genome Release 64-1-1, reverse complement, Verified ORF, "Defining member of the SET3 histone deacetylase complex which is a meiosis-specific repressor of sporulation genes; necessary for efficient transcription by RNAPII; one of two yeast proteins that contains both SET and PHD domains"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q5AW75    1407   JHD1_EMENI JmjC domain-containing histone dem...690.006     43.9     29     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051864; F:histone demethylase activity (H3-K36 specific); IEA:EC.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
32Q9UIF9    1905   BAZ2A_HUMAN Bromodomain adjacent to zinc fing...590.008     43.5     31     51GO:0005677; C:chromatin silencing complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0033553; C:rDNA heterochromatin; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0070577; F:histone acetyl-lysine binding; ISS:UniProtKB.::GO:0016922; F:ligand-dependent nuclear receptor binding; NAS:BHF-UCL.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006338; P:chromatin remodeling; NAS:UniProtKB.::GO:0000183; P:chromatin silencing at rDNA; ISS:UniProtKB.::GO:0006306; P:DNA methylation; ISS:UniProtKB.::GO:0016575; P:histone deacetylation; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; NAS:UniProtKB.
33Q4WNH8    1241   SET1_ASPFU Histone-lysine N-methyltransferase...1280.012     43.1     27     40GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0048188; C:Set1C/COMPASS complex; IEA:InterPro.
GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
34Q2UMH3    1229   SET1_ASPOR Histone-lysine N-methyltransferase...1280.014     42.7     27     40GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0048188; C:Set1C/COMPASS complex; IEA:InterPro.
GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.::GO:0000166; F:nucleotide binding; IEA:InterPro.
35Q12830    3046   BPTF_HUMAN Nucleosome-remodeling factor subun...500.014     42.7     38     46GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0016589; C:NURF complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0043565; F:sequence-specific DNA binding; IDA:HGNC.::GO:0008134; F:transcription factor binding; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007420; P:brain development; IMP:HGNC.::GO:0006338; P:chromatin remodeling; IDA:HGNC.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:HGNC.::GO:0006351; P:transcription, DNA-dependent; IMP:HGNC.
36Q6P949    1063   PHF2_DANRE Lysine-specific demethylase phf2 O...500.016     42.4     42     52GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0032454; F:histone demethylase activity (H3-K9 specific); ISS:UniProtKB.::GO:0005506; F:iron ion binding; ISS:UniProtKB.::GO:0035064; F:methylated histone residue binding; ISS:UniProtKB.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; ISS:UniProtKB.
GO:0061188; P:negative regulation of chromatin silencing at rDNA; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
37Q1DR06    1271   SET1_COCIM Histone-lysine N-methyltransferase...1280.017     42.4     27     40GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0048188; C:Set1C/COMPASS complex; IEA:InterPro.
GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.::GO:0000166; F:nucleotide binding; IEA:InterPro.
38E6ZGB4    1081   PHF2_DICLA Lysine-specific demethylase phf2 O...500.027     41.6     42     52GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0032454; F:histone demethylase activity (H3-K9 specific); ISS:UniProtKB.::GO:0005506; F:iron ion binding; ISS:UniProtKB.::GO:0035064; F:methylated histone residue binding; ISS:UniProtKB.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
39Q91YE5    1889   BAZ2A_MOUSE Bromodomain adjacent to zinc fing...530.031     41.6     32     53GO:0005677; C:chromatin silencing complex; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0033553; C:rDNA heterochromatin; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0070577; F:histone acetyl-lysine binding; IDA:UniProtKB.::GO:0003723; F:RNA binding; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000183; P:chromatin silencing at rDNA; IDA:UniProtKB.::GO:0006306; P:DNA methylation; IDA:UniProtKB.::GO:0016575; P:histone deacetylation; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
40O44757    1312   LIN59_CAEEL Probable histone-lysine N-methylt...680.036     41.2     31     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007413; P:axonal fasciculation; IMP:WormBase.::GO:0016358; P:dendrite development; IMP:WormBase.::GO:0001715; P:ectodermal cell fate specification; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0048566; P:embryonic digestive tract development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0040014; P:regulation of multicellular organism growth; IMP:WormBase.::GO:0045138; P:tail tip morphogenesis; IMP:WormBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
41Q9CWW7    660   CXXC1_MOUSE CpG-binding protein OS=Mus muscul...940.046     40.8     32     46GO:0016363; C:nuclear matrix; IDA:MGI.::GO:0048188; C:Set1C/COMPASS complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
42Q9WTU0    1096   PHF2_MOUSE Lysine-specific demethylase PHF2 O...500.047     40.8     38     54GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0032454; F:histone demethylase activity (H3-K9 specific); ISS:UniProtKB.::GO:0005506; F:iron ion binding; ISS:UniProtKB.::GO:0035064; F:methylated histone residue binding; ISS:UniProtKB.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; ISS:UniProtKB.
GO:0061188; P:negative regulation of chromatin silencing at rDNA; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
43Q5EA28    658   CXXC1_BOVIN CpG-binding protein OS=Bos taurus...930.048     40.8     32     46GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0048188; C:Set1C/COMPASS complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
44Q9M1X9    352   ASHH4_ARATH Putative histone-lysine N-methylt...810.052     40.4     30     47GO:0000775; C:chromosome, centromeric region; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.
45O75151    1096   PHF2_HUMAN Lysine-specific demethylase PHF2 O...500.054     40.8     38     54GO:0005730; C:nucleolus; IDA:UniProtKB.
GO:0032454; F:histone demethylase activity (H3-K9 specific); IDA:UniProtKB.::GO:0005506; F:iron ion binding; IDA:UniProtKB.::GO:0035064; F:methylated histone residue binding; IDA:UniProtKB.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IDA:UniProtKB.
GO:0001889; P:liver development; TAS:UniProtKB.::GO:0061188; P:negative regulation of chromatin silencing at rDNA; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
46Q8X0S9    1313   SET1_NEUCR Histone-lysine N-methyltransferase...1230.058     40.8     24     43GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0048188; C:Set1C/COMPASS complex; IEA:InterPro.
GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.::GO:0000166; F:nucleotide binding; IEA:InterPro.
47Q9UPP1    1060   PHF8_HUMAN Histone lysine demethylase PHF8 OS...490.067     40.4     37     53GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-KW.
GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0071558; F:histone demethylase activity (H3-K27 specific); IDA:UniProtKB.::GO:0051864; F:histone demethylase activity (H3-K36 specific); IDA:UniProtKB.::GO:0032454; F:histone demethylase activity (H3-K9 specific); IDA:UniProtKB.::GO:0035575; F:histone demethylase activity (H4-K20 specific); IDA:UniProtKB.::GO:0005506; F:iron ion binding; IDA:UniProtKB.::GO:0035064; F:methylated histone residue binding; IDA:UniProtKB.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IDA:UniProtKB.
GO:0007420; P:brain development; ISS:UniProtKB.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:UniProtKB.::GO:0061188; P:negative regulation of chromatin silencing at rDNA; IDA:UniProtKB.::GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
48Q80TJ7    1023   PHF8_MOUSE Histone lysine demethylase PHF8 OS...490.072     40.4     37     53GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0071558; F:histone demethylase activity (H3-K27 specific); ISS:UniProtKB.::GO:0051864; F:histone demethylase activity (H3-K36 specific); ISS:UniProtKB.::GO:0032454; F:histone demethylase activity (H3-K9 specific); ISS:UniProtKB.::GO:0035575; F:histone demethylase activity (H4-K20 specific); ISS:UniProtKB.::GO:0005506; F:iron ion binding; ISS:UniProtKB.::GO:0035064; F:methylated histone residue binding; ISS:UniProtKB.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; ISS:UniProtKB.
GO:0007420; P:brain development; ISS:UniProtKB.::GO:0000082; P:G1/S transition of mitotic cell cycle; ISS:UniProtKB.::GO:0061188; P:negative regulation of chromatin silencing at rDNA; ISS:UniProtKB.::GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
49Q9P0U4    656   CXXC1_HUMAN CpG-binding protein OS=Homo sapie...560.085     40     39     50GO:0016607; C:nuclear speck; IDA:LIFEdb.::GO:0048188; C:Set1C/COMPASS complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0045322; F:unmethylated CpG binding; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006987; P:activation of signaling protein activity involved in unfolded protein response; TAS:Reactome.::GO:0051568; P:histone H3-K4 methylation; IDA:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
50Q9Y7R4    920   SET1_SCHPO Histone-lysine N-methyltransferase...1280.085     40     26     43GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0000790; C:nuclear chromatin; NAS:PomBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:PomBase.
GO:0042800; F:histone methyltransferase activity (H3-K4 specific); TAS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0000077; P:DNA damage checkpoint; IGI:PomBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0000723; P:telomere maintenance; IMP:PomBase.
51Q2GWF3    1076   SET1_CHAGB Histone-lysine N-methyltransferase...1230.092     40     27     45GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.::GO:0000166; F:nucleotide binding; IEA:InterPro.
52Q9P7P2    528   HOP1_SCHPO Meiosis-specific protein hop1 OS=S...500.096     39.7     30     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0030998; C:linear element; IDA:PomBase.
GO:0003677; F:DNA binding; ISS:PomBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051276; P:chromosome organization; IC:PomBase.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0032446; P:protein modification by small protein conjugation; IC:PomBase.
53Q5B0Y5    1220   SET1_EMENI Histone-lysine N-methyltransferase...1280.097     40     26     39GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0048188; C:Set1C/COMPASS complex; IEA:InterPro.
GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
54Q5EAW9    845   TAF3_XENLA Transcription initiation factor TF...430.1     39.7     33     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
55O96028    1365   NSD2_HUMAN Probable histone-lysine N-methyltr...850.11     39.7     29     48GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009653; P:anatomical structure morphogenesis; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
56Q8BVE8    1365   NSD2_MOUSE Probable histone-lysine N-methyltr...850.11     39.7     29     47GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0018024; F:histone-lysine N-methyltransferase activity; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0003289; P:atrial septum primum morphogenesis; IMP:MGI.::GO:0003290; P:atrial septum secundum morphogenesis; IMP:MGI.::GO:0060348; P:bone development; IMP:MGI.::GO:0003149; P:membranous septum morphogenesis; IMP:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IGI:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
57Q9HDV4    1513   LID2_SCHPO Lid2 complex component lid2 OS=Sch...520.13     39.7     35     50GO:0048189; C:Lid2 complex; IDA:PomBase.::GO:0031934; C:mating-type region heterochromatin; IDA:PomBase.::GO:0031618; C:nuclear centromeric heterochromatin; IDA:PomBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0034647; F:histone demethylase activity (H3-trimethyl-K4 specific); IDA:PomBase.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030702; P:chromatin silencing at centromere; IMP:PomBase.::GO:0030466; P:chromatin silencing at silent mating-type cassette; IMP:PomBase.::GO:0031507; P:heterochromatin assembly; IMP:PomBase.::GO:0051567; P:histone H3-K9 methylation; IMP:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0051572; P:negative regulation of histone H3-K4 methylation; IMP:PomBase.::GO:0034630; P:RITS complex localization; IMP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
58P0CH95    1032   PHF8_DANRE Histone lysine demethylase PHF8 OS...480.14     39.3     38     50GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0071558; F:histone demethylase activity (H3-K27 specific); ISS:UniProtKB.::GO:0051864; F:histone demethylase activity (H3-K36 specific); ISS:UniProtKB.::GO:0032454; F:histone demethylase activity (H3-K9 specific); ISS:UniProtKB.::GO:0035575; F:histone demethylase activity (H4-K20 specific); ISS:UniProtKB.::GO:0035064; F:methylated histone residue binding; ISS:UniProtKB.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007420; P:brain development; IMP:UniProtKB.::GO:0000082; P:G1/S transition of mitotic cell cycle; ISS:UniProtKB.::GO:0061188; P:negative regulation of chromatin silencing at rDNA; ISS:UniProtKB.::GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
59Q5XJV7    1441   SETD5_MOUSE SET domain-containing protein 5 O...820.16     39.3     29     51
60Q9C0A6    1442   SETD5_HUMAN SET domain-containing protein 5 O...820.17     39.3     29     51
61Q5F3R2    1522   KDM5B_CHICK Lysine-specific demethylase 5B OS...330.17     39.3     45     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0034648; F:histone demethylase activity (H3-dimethyl-K4 specific); ISS:UniProtKB.::GO:0034647; F:histone demethylase activity (H3-trimethyl-K4 specific); ISS:UniProtKB.::GO:0016706; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; IEA:InterPro.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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