Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR008W
Length:
625
Number of sequences:
5887
Description:
YKR008W RSC4 SGDID:S000001716, Chr XI from 452201-454078, Genome Release 64-1-1, Verified ORF, "Component of the RSC chromatin remodeling complex; found in close proximity to nucleosomal DNA; displaced from the surface of nucleosomal DNA after chromatin remodeling; acetylated (K25) by Gcn5p, altering replication stress tolerance; contains tandem bromodomains that recognize histone H3 acetylated on K14 (H3K14ac) by Gcn5p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61Q60544    1865   TAF1_MESAU Transcription initiation factor TF...2130.00007     50.1     26     44GO:0071339; C:MLL1 complex; ISS:UniProtKB.::GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004402; F:histone acetyltransferase activity; ISS:UniProtKB.::GO:0004674; F:protein serine/threonine kinase activity; ISS:UniProtKB.
GO:0000080; P:G1 phase of mitotic cell cycle; IMP:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
62Q92830    837   KAT2A_HUMAN Histone acetyltransferase KAT2A O...900.00007     49.7     31     50GO:0005671; C:Ada2/Gcn5/Ada3 transcription activator complex; IDA:BHF-UCL.::GO:0030914; C:STAGA complex; IDA:UniProtKB.::GO:0033276; C:transcription factor TFTC complex; IDA:UniProtKB.
GO:0010484; F:H3 histone acetyltransferase activity; IDA:BHF-UCL.::GO:0042826; F:histone deacetylase binding; IPI:UniProtKB.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.
GO:0006338; P:chromatin remodeling; TAS:ProtInc.::GO:0016578; P:histone deubiquitination; IDA:UniProtKB.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
63Q91Y44    956   BRDT_MOUSE Bromodomain testis-specific protei...780.001     45.8     36     53GO:0005634; C:nucleus; IDA:MGI.
GO:0042393; F:histone binding; IDA:MGI.
GO:0006338; P:chromatin remodeling; IDA:MGI.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
64Q93YS6    688   GTE9_ARATH Transcription factor GTE9 OS=Arabi...620.00008     49.3     37     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
65Q58F21    947   BRDT_HUMAN Bromodomain testis-specific protei...760.002     45.1     32     51GO:0005634; C:nucleus; IDA:HPA.
GO:0004674; F:protein serine/threonine kinase activity; TAS:ProtInc.::GO:0003713; F:transcription coactivator activity; TAS:ProtInc.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
66Q9UTN6    1199   SNF21_SCHPO Chromatin structure-remodeling co...890.45     37.4     28     51GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0016586; C:RSC complex; IDA:PomBase.
GO:0005524; F:ATP binding; IC:PomBase.::GO:0004003; F:ATP-dependent DNA helicase activity; ISS:PomBase.::GO:0000991; F:core RNA polymerase II binding transcription factor activity; ISS:PomBase.::GO:0003677; F:DNA binding; IC:PomBase.
GO:0006338; P:chromatin remodeling; ISS:PomBase.
67P54816    1291   TBP7_CAEEL Tat-binding homolog 7 OS=Caenorhab...860.0002     48.5     34     56
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0008406; P:gonad development; IMP:WormBase.::GO:0045132; P:meiotic chromosome segregation; IMP:WormBase.::GO:0031445; P:regulation of heterochromatin assembly; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
68P35817    686   BDF1_YEAST Bromodomain-containing factor 1 OS...950.004     43.9     32     49GO:0000812; C:Swr1 complex; IDA:SGD.
GO:0003682; F:chromatin binding; IDA:SGD.::GO:0001047; F:core promoter binding; IDA:SGD.::GO:0070577; F:histone acetyl-lysine binding; IDA:SGD.::GO:0001094; F:TFIID-class transcription factor binding; IDA:SGD.
GO:0006338; P:chromatin remodeling; IPI:SGD.::GO:0006281; P:DNA repair; IMP:SGD.::GO:0031452; P:negative regulation of heterochromatin assembly; IMP:SGD.::GO:1900051; P:positive regulation of histone exchange; IMP:SGD.::GO:0090054; P:regulation of chromatin silencing at silent mating-type cassette; IMP:SGD.::GO:0031938; P:regulation of chromatin silencing at telomere; IMP:SGD.::GO:0034401; P:regulation of transcription by chromatin organization; IMP:SGD.::GO:0009301; P:snRNA transcription; IMP:SGD.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
69Q9LK27    813   GTE8_ARATH Transcription factor GTE8 OS=Arabi...770.0002     48.1     32     49GO:0009507; C:chloroplast; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
70Q8IZX4    1826   TAF1L_HUMAN Transcription initiation factor T...2130.0002     48.1     26     45GO:0005669; C:transcription factor TFIID complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004402; F:histone acetyltransferase activity; ISS:UniProtKB.::GO:0004674; F:protein serine/threonine kinase activity; ISS:UniProtKB.::GO:0017025; F:TBP-class protein binding; IPI:UniProtKB.
GO:0007140; P:male meiosis; IEP:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
71P32597    1359   STH1_YEAST Nuclear protein STH1/NPS1 OS=Sacch...840.0002     48.1     27     55GO:0000775; C:chromosome, centromeric region; IDA:UniProtKB.::GO:0016586; C:RSC complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0008094; F:DNA-dependent ATPase activity; IDA:SGD.::GO:0004386; F:helicase activity; IDA:UniProtKB.::GO:0070577; F:histone acetyl-lysine binding; IDA:SGD.
GO:0043044; P:ATP-dependent chromatin remodeling; IDA:UniProtKB.::GO:0031055; P:chromatin remodeling at centromere; IMP:SGD.::GO:0007010; P:cytoskeleton organization; IGI:UniProtKB.::GO:0006302; P:double-strand break repair; IMP:SGD.::GO:0000086; P:G2/M transition of mitotic cell cycle; IMP:UniProtKB.::GO:0007126; P:meiosis; IMP:UniProtKB.::GO:0006337; P:nucleosome disassembly; IDA:SGD.::GO:0016584; P:nucleosome positioning; IMP:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IDA:SGD.
72Q7Y214    590   GTE7_ARATH Transcription factor GTE7 OS=Arabi...720.0002     47.8     35     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0009294; P:DNA mediated transformation; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
73Q99MY8    2958   ASH1L_MOUSE Histone-lysine N-methyltransferas...1060.0002     48.1     29     49GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005923; C:tight junction; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
74P35177    1332   SPT7_YEAST Transcriptional activator SPT7 OS=...822.3     35     28     51GO:0005739; C:mitochondrion; IDA:SGD.::GO:0000124; C:SAGA complex; IDA:SGD.::GO:0046695; C:SLIK (SAGA-like) complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; IDA:SGD.
GO:0000747; P:conjugation with cellular fusion; IMP:SGD.::GO:0016573; P:histone acetylation; IDA:SGD.::GO:0006461; P:protein complex assembly; IMP:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
75Q9DE13    2130   BAZ2B_CHICK Bromodomain adjacent to zinc fing...740.0003     48.1     31     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
76Q4R8Y1    947   BRDT_MACFA Bromodomain testis-specific protei...760.001     45.8     33     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
77Q6PL18    1390   ATAD2_HUMAN ATPase family AAA domain-containi...940.0003     47.8     31     53GO:0005634; C:nucleus; IDA:HPA.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:EC.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
78Q8K2F0    726   BRD3_MOUSE Bromodomain-containing protein 3 O...820.013     42.4     32     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
79P22082    1703   SNF2_YEAST Transcription regulatory protein S...740.0005     47     31     57GO:0016514; C:SWI/SNF complex; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IDA:SGD.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0070577; F:histone acetyl-lysine binding; IDA:SGD.::GO:0031492; F:nucleosomal DNA binding; IDA:SGD.
GO:0043044; P:ATP-dependent chromatin remodeling; IDA:SGD.::GO:0044109; P:cellular alcohol catabolic process; IMP:SGD.::GO:0006261; P:DNA-dependent DNA replication; IMP:SGD.::GO:0006302; P:double-strand break repair; IMP:SGD.::GO:0042766; P:nucleosome mobilization; IDA:SGD.::GO:0031496; P:positive regulation of mating type switching; IMP:SGD.::GO:0061412; P:positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation; IMP:SGD.::GO:0042148; P:strand invasion; IMP:SGD.::GO:0005987; P:sucrose catabolic process; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
80Q9LXA7    581   GTE2_ARATH Transcription factor GTE2 OS=Arabi...650.0006     46.6     40     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0009294; P:DNA mediated transformation; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
81Q9ULI0    1458   ATD2B_HUMAN ATPase family AAA domain-containi...940.0006     47     33     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
82Q15059    726   BRD3_HUMAN Bromodomain-containing protein 3 O...760.016     42     33     53GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
83Q8CDM1    1040   ATAD2_MOUSE ATPase family AAA domain-containi...940.0006     46.6     31     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:EC.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
84P53236    928   RSC1_YEAST Chromatin structure-remodeling com...880.017     42     31     53GO:0016586; C:RSC complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0043044; P:ATP-dependent chromatin remodeling; IC:UniProtKB.::GO:0006303; P:double-strand break repair via nonhomologous end joining; IPI:SGD.::GO:0006337; P:nucleosome disassembly; IDA:SGD.::GO:0042173; P:regulation of sporulation resulting in formation of a cellular spore; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IDA:SGD.
85Q5RDX4    1091   ATAD2_PONAB ATPase family AAA domain-containi...940.0008     46.2     31     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:EC.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
86A8DZJ1    1441   BAZ1B_XENLA Tyrosine-protein kinase BAZ1B OS=...620.001     46.2     31     55GO:0016585; C:chromatin remodeling complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0070577; F:histone acetyl-lysine binding; ISS:UniProtKB.::GO:0035173; F:histone kinase activity; ISS:UniProtKB.::GO:0004715; F:non-membrane spanning protein tyrosine kinase activity; IEA:EC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006974; P:response to DNA damage stimulus; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
87Q9UIF9    1905   BAZ2A_HUMAN Bromodomain adjacent to zinc fing...740.001     45.8     31     51GO:0005677; C:chromatin silencing complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0033553; C:rDNA heterochromatin; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0070577; F:histone acetyl-lysine binding; ISS:UniProtKB.::GO:0016922; F:ligand-dependent nuclear receptor binding; NAS:BHF-UCL.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006338; P:chromatin remodeling; NAS:UniProtKB.::GO:0000183; P:chromatin silencing at rDNA; ISS:UniProtKB.::GO:0006306; P:DNA methylation; ISS:UniProtKB.::GO:0016575; P:histone deacetylation; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; NAS:UniProtKB.
88P13709    2038   FSH_DROME Homeotic protein female sterile OS=...760.018     42     29     51GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:FlyBase.::GO:0007362; P:terminal region determination; IMP:FlyBase.
89Q07442    638   BDF2_YEAST Bromodomain-containing factor 2 OS...820.032     40.8     29     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IC:SGD.
GO:0001047; F:core promoter binding; IDA:SGD.::GO:0070577; F:histone acetyl-lysine binding; IDA:SGD.::GO:0001094; F:TFIID-class transcription factor binding; IPI:SGD.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0031452; P:negative regulation of heterochromatin assembly; IMP:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
90Q91YE5    1889   BAZ2A_MOUSE Bromodomain adjacent to zinc fing...740.002     45.4     30     51GO:0005677; C:chromatin silencing complex; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0033553; C:rDNA heterochromatin; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0070577; F:histone acetyl-lysine binding; IDA:UniProtKB.::GO:0003723; F:RNA binding; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000183; P:chromatin silencing at rDNA; IDA:UniProtKB.::GO:0006306; P:DNA methylation; IDA:UniProtKB.::GO:0016575; P:histone deacetylation; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
91O15016    1216   TRI66_HUMAN Tripartite motif-containing prote...910.002     45.1     32     51GO:0016235; C:aggresome; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
GO:0008270; F:zinc ion binding; IEA:InterPro.
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