Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR008W
Length:
625
Number of sequences:
5887
Description:
YKR008W RSC4 SGDID:S000001716, Chr XI from 452201-454078, Genome Release 64-1-1, Verified ORF, "Component of the RSC chromatin remodeling complex; found in close proximity to nucleosomal DNA; displaced from the surface of nucleosomal DNA after chromatin remodeling; acetylated (K25) by Gcn5p, altering replication stress tolerance; contains tandem bromodomains that recognize histone H3 acetylated on K14 (H3K14ac) by Gcn5p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
121Q67W65    1810   TAF1_ORYSJ Transcription initiation factor TF...560.034     41.2     32     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
122Q6GLP7    527   BRD9_XENLA Bromodomain-containing protein 9 O...590.043     40.4     32     53
123Q9ULD4    1205   BRPF3_HUMAN Bromodomain and PHD finger-contai...780.057     40.4     26     49GO:0005829; C:cytosol; TAS:Reactome.::GO:0005576; C:extracellular region; TAS:Reactome.::GO:0070776; C:MOZ/MORF histone acetyltransferase complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043966; P:histone H3 acetylation; IDA:UniProtKB.::GO:0030168; P:platelet activation; TAS:Reactome.::GO:0002576; P:platelet degranulation; TAS:Reactome.
124Q55BK3    234   Y1118_DICDI Bromodomain-containing protein DD...540.065     39.3     43     59
125P55201    1214   BRPF1_HUMAN Peregrin OS=Homo sapiens (Human)....790.068     40     29     47GO:0005737; C:cytoplasm; IDA:HPA.::GO:0070776; C:MOZ/MORF histone acetyltransferase complex; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:HPA.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043966; P:histone H3 acetylation; IDA:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
126Q9S7T1    461   GTE3_ARATH Transcription factor GTE3, chlorop...640.076     39.7     34     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0042393; F:histone binding; IPI:TAIR.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
127O95696    1058   BRD1_HUMAN Bromodomain-containing protein 1 O...790.15     38.9     23     49GO:0070776; C:MOZ/MORF histone acetyltransferase complex; IDA:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043966; P:histone H3 acetylation; IDA:UniProtKB.
128O74350    299   BDC1_SCHPO Bromodomain-containing protein 1 O...660.3     37.4     26     55GO:0035267; C:NuA4 histone acetyltransferase complex; IDA:PomBase.::GO:0000790; C:nuclear chromatin; NAS:PomBase.
GO:0016573; P:histone acetylation; IC:PomBase.
129O88665    651   BRD7_MOUSE Bromodomain-containing protein 7 O...760.45     37.4     28     47GO:0005634; C:nucleus; IPI:MGI.
GO:0070577; F:histone acetyl-lysine binding; ISS:UniProtKB.::GO:0002039; F:p53 binding; ISS:UniProtKB.::GO:0003713; F:transcription coactivator activity; ISS:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0008285; P:negative regulation of cell proliferation; ISS:UniProtKB.::GO:2000134; P:negative regulation of G1/S transition of mitotic cell cycle; ISS:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0035066; P:positive regulation of histone acetylation; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
130Q9NPI1    651   BRD7_HUMAN Bromodomain-containing protein 7 O...760.46     37.4     28     47GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0070577; F:histone acetyl-lysine binding; IDA:UniProtKB.::GO:0002039; F:p53 binding; IPI:UniProtKB.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.::GO:0008134; F:transcription factor binding; IDA:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0008285; P:negative regulation of cell proliferation; IDA:UniProtKB.::GO:2000134; P:negative regulation of G1/S transition of mitotic cell cycle; IDA:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0035066; P:positive regulation of histone acetylation; IDA:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
131Q5R8B0    651   BRD7_PONAB Bromodomain-containing protein 7 O...760.47     37.4     28     47GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0070577; F:histone acetyl-lysine binding; ISS:UniProtKB.::GO:0002039; F:p53 binding; ISS:UniProtKB.::GO:0003713; F:transcription coactivator activity; ISS:UniProtKB.::GO:0003714; F:transcription corepressor activity; ISS:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0008285; P:negative regulation of cell proliferation; ISS:UniProtKB.::GO:2000134; P:negative regulation of G1/S transition of mitotic cell cycle; ISS:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0035066; P:positive regulation of histone acetylation; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
132F4IAE9    1210   Y1591_ARATH ATPase family AAA domain-containi...520.49     37.4     31     54
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
133Q9LNC4    766   GTE4_ARATH Transcription factor GTE4 OS=Arabi...620.54     37     32     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0007049; P:cell cycle; IMP:TAIR.::GO:0009294; P:DNA mediated transformation; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0048364; P:root development; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
134Q54MP8    2200   Y5837_DICDI Bromodomain and WD repeat-contain...710.75     37     25     52
135Q9H8M2    597   BRD9_HUMAN Bromodomain-containing protein 9 O...541.1     35.8     30     46
GO:0003676; F:nucleic acid binding; NAS:UniProtKB.
136Q3UQU0    596   BRD9_MOUSE Bromodomain-containing protein 9 O...541.5     35.4     30     46
137Q5ZKG2    651   BRD7_CHICK Bromodomain-containing protein 7 O...761.8     35.4     26     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
138A9BF32    1643   RPOC_PETMO DNA-directed RNA polymerase subuni...1782.1     35.4     25     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
139Q54DH8    2310   TAF1_DICDI Transcription initiation factor TF...775.5     33.9     27     51GO:0005669; C:transcription factor TFIID complex; ISS:dictyBase.
GO:0005524; F:ATP binding; ISS:dictyBase.::GO:0004402; F:histone acetyltransferase activity; ISS:dictyBase.
GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:dictyBase.::GO:0006461; P:protein complex assembly; ISS:dictyBase.::GO:0006468; P:protein phosphorylation; ISS:dictyBase.::GO:0000114; P:regulation of transcription involved in G1 phase of mitotic cell cycle; ISS:dictyBase.
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