Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKR002W
Length:
568
Number of sequences:
5887
Description:
YKR002W PAP1 SGDID:S000001710, Chr XI from 443232-444938, Genome Release 64-1-1, Verified ORF, "Poly(A) polymerase, one of three factors required for mRNA 3'-end polyadenylation, forms multiprotein complex with polyadenylation factor I (PF I), also required for mRNA nuclear export; may also polyadenylate rRNAs; required for gene looping"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P29468    568   PAP_YEAST Poly(A) polymerase OS=Saccharomyces...5680     1178     100     100GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:SGD.
GO:0005524; F:ATP binding; IDA:UniProtKB.::GO:0000287; F:magnesium ion binding; IDA:UniProtKB.::GO:0004652; F:polynucleotide adenylyltransferase activity; IDA:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006378; P:mRNA polyadenylation; IDA:SGD.::GO:0071050; P:snoRNA polyadenylation; IGI:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
2Q9UW26    555   PAPA_CANAL Poly(A) polymerase PAPa OS=Candida...5490     701     61     78GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004652; F:polynucleotide adenylyltransferase activity; IDA:CGD.::GO:0003723; F:RNA binding; IDA:CGD.
GO:0006378; P:mRNA polyadenylation; IDA:CGD.::GO:0044011; P:single-species biofilm formation on inanimate substrate; IMP:CGD.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
3O42617    558   PAP_CANAL Poly(A) polymerase PAPalpha OS=Cand...5650     666     59     75GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004652; F:polynucleotide adenylyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043631; P:RNA polyadenylation; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
4Q10295    566   PAP_SCHPO Poly(A) polymerase pla1 OS=Schizosa...5700     599     53     69GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IGI:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004652; F:polynucleotide adenylyltransferase activity; IGI:PomBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006378; P:mRNA polyadenylation; IGI:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
5Q54J73    809   PAP_DICDI Poly(A) polymerase OS=Dictyostelium...5686e-131     409     39     57GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:dictyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004652; F:polynucleotide adenylyltransferase activity; ISS:dictyBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006378; P:mRNA polyadenylation; ISS:dictyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
6Q9BWT3    736   PAPOG_HUMAN Poly(A) polymerase gamma OS=Homo ...4003e-127     397     47     67GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004652; F:polynucleotide adenylyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043631; P:RNA polyadenylation; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
7Q9WVP6    641   PAPOB_MOUSE Poly(A) polymerase beta OS=Mus mu...3998e-127     392     48     69GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005783; C:endoplasmic reticulum; IPI:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004652; F:polynucleotide adenylyltransferase activity; IEA:EC.::GO:0005515; F:protein binding; IPI:MGI.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043631; P:RNA polyadenylation; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
8Q6PCL9    739   PAPOG_MOUSE Poly(A) polymerase gamma OS=Mus m...4002e-126     395     47     67GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004652; F:polynucleotide adenylyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043631; P:RNA polyadenylation; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
9P51003    745   PAPOA_HUMAN Poly(A) polymerase alpha OS=Homo ...4215e-126     394     46     67GO:0005737; C:cytoplasm; TAS:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0000287; F:magnesium ion binding; ISS:UniProtKB.::GO:0030145; F:manganese ion binding; ISS:UniProtKB.::GO:0004652; F:polynucleotide adenylyltransferase activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; NAS:UniProtKB.
GO:0006378; P:mRNA polyadenylation; NAS:UniProtKB.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.
10Q61183    739   PAPOA_MOUSE Poly(A) polymerase alpha OS=Mus m...4216e-126     393     46     67GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0000287; F:magnesium ion binding; ISS:UniProtKB.::GO:0030145; F:manganese ion binding; ISS:UniProtKB.::GO:0004652; F:polynucleotide adenylyltransferase activity; ISS:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043631; P:RNA polyadenylation; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
11P25500    739   PAPOA_BOVIN Poly(A) polymerase alpha OS=Bos t...4218e-126     393     46     67GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IDA:UniProtKB.::GO:0000287; F:magnesium ion binding; IDA:UniProtKB.::GO:0030145; F:manganese ion binding; IDA:UniProtKB.::GO:0004652; F:polynucleotide adenylyltransferase activity; IDA:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043631; P:RNA polyadenylation; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
12Q9NRJ5    636   PAPOB_HUMAN Poly(A) polymerase beta OS=Homo s...3973e-124     386     47     69GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004652; F:polynucleotide adenylyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043631; P:RNA polyadenylation; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
13P51004    715   PAPO1_XENLA Poly(A) polymerase alpha-A OS=Xen...3996e-123     385     47     69GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004652; F:polynucleotide adenylyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043631; P:RNA polyadenylation; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
14P51006    400   PAPO3_XENLA Poly(A) polymerase type 3 OS=Xeno...3585e-116     357     48     69GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004652; F:polynucleotide adenylyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043631; P:RNA polyadenylation; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
15P51005    484   PAPO2_XENLA Poly(A) polymerase alpha-B OS=Xen...1791e-45     172     45     69GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004652; F:polynucleotide adenylyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043631; P:RNA polyadenylation; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
16Q51D88    522   PAP_ENTHI Poly(A) polymerase OS=Entamoeba his...2984e-40     156     32     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004652; F:polynucleotide adenylyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043631; P:RNA polyadenylation; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
17O13798    1202   CID16_SCHPO Caffeine-induced protein 16 OS=Sc...1670.001     45.8     25     41GO:0005737; C:cytoplasm; IDA:PomBase.
GO:0004652; F:polynucleotide adenylyltransferase activity; NAS:PomBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
18Q83GP6    333   ILVC_TROWT Ketol-acid reductoisomerase OS=Tro...800.023     40.8     35     56
GO:0050662; F:coenzyme binding; IEA:InterPro.::GO:0004455; F:ketol-acid reductoisomerase activity; IEA:EC.
GO:0009082; P:branched chain family amino acid biosynthetic process; IEA:UniProtKB-KW.
19Q83HI9    333   ILVC_TROW8 Ketol-acid reductoisomerase OS=Tro...800.025     40.8     35     56
GO:0050662; F:coenzyme binding; IEA:InterPro.::GO:0004455; F:ketol-acid reductoisomerase activity; IEA:EC.
GO:0009082; P:branched chain family amino acid biosynthetic process; IEA:UniProtKB-KW.
20Q9UTN3    684   CID14_SCHPO Poly(A) RNA polymerase cid14 OS=S...1900.27     37.7     22     41GO:0005730; C:nucleolus; IDA:PomBase.::GO:0031499; C:TRAMP complex; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004652; F:polynucleotide adenylyltransferase activity; IMP:PomBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0065007; P:biological regulation; NAS:PomBase.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043630; P:ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process; ISS:PomBase.::GO:0007000; P:nucleolus organization; IMP:PomBase.::GO:0031125; P:rRNA 3'-end processing; IGI:PomBase.::GO:0016075; P:rRNA catabolic process; IGI:PomBase.::GO:0016077; P:snoRNA catabolic process; ISS:PomBase.::GO:0016078; P:tRNA catabolic process; ISS:PomBase.
21P53632    584   PAP2_YEAST Poly(A) RNA polymerase protein 2 O...800.39     37.4     34     54GO:0005730; C:nucleolus; IDA:SGD.::GO:0031499; C:TRAMP complex; IDA:SGD.
GO:0051575; F:5'-deoxyribose-5-phosphate lyase activity; IDA:SGD.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004652; F:polynucleotide adenylyltransferase activity; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006284; P:base-excision repair; IMP:SGD.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0071044; P:histone mRNA catabolic process; IGI:SGD.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0071040; P:nuclear polyadenylation-dependent antisense transcript catabolic process; IMP:SGD.::GO:0071039; P:nuclear polyadenylation-dependent CUT catabolic process; IMP:SGD.::GO:0071042; P:nuclear polyadenylation-dependent mRNA catabolic process; IGI:SGD.::GO:0071035; P:nuclear polyadenylation-dependent rRNA catabolic process; IMP:SGD.::GO:0071036; P:nuclear polyadenylation-dependent snoRNA catabolic process; IMP:SGD.::GO:0071037; P:nuclear polyadenylation-dependent snRNA catabolic process; IMP:SGD.::GO:0071038; P:nuclear polyadenylation-dependent tRNA catabolic process; IDA:SGD.::GO:0071051; P:polyadenylation-dependent snoRNA 3'-end processing; IGI:SGD.::GO:0071050; P:snoRNA polyadenylation; IGI:SGD.::GO:0006400; P:tRNA modification; IMP:SGD.::GO:0034475; P:U4 snRNA 3'-end processing; IMP:SGD.
22Q5BLK4    1491   TUT7_MOUSE Terminal uridylyltransferase 7 OS=...951.3     35.8     28     47GO:0005622; C:intracellular; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0050265; F:RNA uridylyltransferase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0031123; P:RNA 3'-end processing; ISS:UniProtKB.
23Q46AZ4    454   CCA_METBF CCA-adding enzyme OS=Methanosarcina...1151.7     35     26     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0052929; F:ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity; IEA:EC.::GO:0052928; F:CTP:3'-cytidine-tRNA cytidylyltransferase activity; IEA:EC.::GO:0052927; F:CTP:tRNA cytidylyltransferase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0004810; F:tRNA adenylyltransferase activity; IEA:InterPro.::GO:0016437; F:tRNA cytidylyltransferase activity; IEA:InterPro.
GO:0042245; P:RNA repair; IEA:UniProtKB-KW.::GO:0001680; P:tRNA 3'-terminal CCA addition; IEA:EC.
24Q86Z98    931   KINH_GIBMO Kinesin heavy chain OS=verticillio...1195.1     33.9     28     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003777; F:microtubule motor activity; IEA:InterPro.
GO:0007018; P:microtubule-based movement; IEA:InterPro.
25Q9R9N3    447   ODP2_RHIME Dihydrolipoyllysine-residue acetyl...1145.5     33.5     29     48GO:0045254; C:pyruvate dehydrogenase complex; IEA:InterPro.
GO:0004742; F:dihydrolipoyllysine-residue acetyltransferase activity; IEA:EC.
GO:0006096; P:glycolysis; IEA:UniProtKB-KW.::GO:0006090; P:pyruvate metabolic process; IEA:InterPro.
26Q6CAR6    736   SYF1_YARLI Pre-mRNA-splicing factor SYF1 OS=l...1387.8     33.1     24     42GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
27Q9CG55    759   METE_LACLA 5-methyltetrahydropteroyltriglutam...1268.3     33.1     24     46
GO:0003871; F:5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity; IEA:EC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009086; P:methionine biosynthetic process; IEA:UniProtKB-KW.
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