Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL213C
Length:
715
Number of sequences:
5887
Description:
YKL213C DOA1 SGDID:S000001696, Chr XI from 34107-31960, Genome Release 64-1-1, reverse complement, Verified ORF, "WD repeat protein required for ubiquitin-mediated protein degradation, forms complex with Cdc48p, plays a role in controlling cellular ubiquitin concentration; also promotes efficient NHEJ in postdiauxic/stationary phase"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
931Q28XF0    786   BOP1_DROPS Ribosome biogenesis protein BOP1 h...580.35     38.1     34     57GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
932A1D7I5    340   EIF3I_NEOFI Eukaryotic translation initiation...520.35     37.4     33     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
933B4MYI5    778   BOP1_DROWI Ribosome biogenesis protein BOP1 h...580.35     37.7     34     57GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
934Q6DDF0    495   WDR37_XENLA WD repeat-containing protein 37 O...1640.36     37.7     22     40
935Q6DFC6    832   WDR75_XENLA WD repeat-containing protein 75 O...660.36     37.7     29     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003824; F:catalytic activity; IEA:InterPro.
936Q4WX90    340   EIF3I_ASPFU Eukaryotic translation initiation...520.37     37.4     33     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
937B0XYC8    340   EIF3I_ASPFC Eukaryotic translation initiation...520.37     37.4     33     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
938A2RRH5    827   WDR27_HUMAN WD repeat-containing protein 27 O...1480.38     37.7     25     45
939Q4VBE8    431   WDR18_MOUSE WD repeat-containing protein 18 O...1131.3     35.8     31     47
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
940Q9BV38    432   WDR18_HUMAN WD repeat-containing protein 18 O...1121.2     35.8     30     48
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
941Q8K3E5    1047   AHI1_MOUSE Jouberin OS=Mus musculus (Mouse). ...1130.39     37.7     24     43GO:0005912; C:adherens junction; ISS:UniProtKB.::GO:0005911; C:cell-cell junction; ISS:UniProtKB.::GO:0005814; C:centriole; IDA:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.::GO:0036038; C:TCTN-B9D complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0042384; P:cilium assembly; IMP:UniProtKB.::GO:0035844; P:cloaca development; IGI:UniProtKB.::GO:0001947; P:heart looping; IGI:UniProtKB.::GO:0030902; P:hindbrain development; IGI:UniProtKB.::GO:0070121; P:Kupffer's vesicle development; ISS:UniProtKB.::GO:0070986; P:left/right axis specification; ISS:UniProtKB.::GO:0001738; P:morphogenesis of a polarized epithelium; IMP:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; IMP:UniProtKB.::GO:0071599; P:otic vesicle development; IGI:UniProtKB.::GO:0035845; P:photoreceptor cell outer segment organization; IGI:UniProtKB.::GO:0030862; P:positive regulation of polarized epithelial cell differentiation; IMP:UniProtKB.::GO:0002092; P:positive regulation of receptor internalization; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0039023; P:pronephric duct morphogenesis; ISS:UniProtKB.::GO:0039008; P:pronephric nephron tubule morphogenesis; IGI:UniProtKB.::GO:0033365; P:protein localization to organelle; IMP:UniProtKB.::GO:0050795; P:regulation of behavior; IMP:UniProtKB.::GO:0010842; P:retina layer formation; IGI:UniProtKB.::GO:0065001; P:specification of axis polarity; IGI:UniProtKB.::GO:0007169; P:transmembrane receptor protein tyrosine kinase signaling pathway; IMP:UniProtKB.::GO:0016192; P:vesicle-mediated transport; IMP:UniProtKB.
942A4REK3    289   SEC13_MAGO7 Protein transport protein SEC13 O...1641.6     35.4     22     40GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
943P79083    328   EIF3I_SCHPO Eukaryotic translation initiation...991     35.8     30     51GO:0005829; C:cytosol; IDA:PomBase.::GO:0016282; C:eukaryotic 43S preinitiation complex; IDA:PomBase.::GO:0071540; C:eukaryotic translation initiation factor 3 complex, eIF3e; IDA:PomBase.::GO:0071541; C:eukaryotic translation initiation factor 3 complex, eIF3m; IDA:PomBase.::GO:0034399; C:nuclear periphery; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0065007; P:biological regulation; NAS:PomBase.::GO:0071470; P:cellular response to osmotic stress; IMP:PomBase.::GO:0002183; P:cytoplasmic translational initiation; NAS:PomBase.
944B4MA12    397   WUHO_DROVI tRNA (guanine-N(7)-)-methyltransfe...920.4     37.4     28     51GO:0001674; C:female germ cell nucleus; ISS:UniProtKB.::GO:0001673; C:male germ cell nucleus; ISS:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
945A5DGL8    348   EIF3I_PICGU Eukaryotic translation initiation...2624.1     34.3     25     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
946Q6PAC3    445   DCA13_MOUSE DDB1- and CUL4-associated factor ...960.41     37.4     28     42GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
947Q9NV06    445   DCA13_HUMAN DDB1- and CUL4-associated factor ...960.41     37.4     27     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
948Q5R4T8    445   DCA13_PONAB DDB1- and CUL4-associated factor ...960.42     37.4     27     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
949O13982    399   YEC8_SCHPO Uncharacterized WD repeat-containi...2380.75     36.6     22     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0000027; P:ribosomal large subunit assembly; ISS:PomBase.
950Q6ZQQ6    2873   WDR87_HUMAN WD repeat-containing protein 87 O...720.42     37.7     26     53
951Q9UT57    608   CFD1_SCHPO Probable cytosolic Fe-S cluster as...1010.43     37.7     26     50GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; ISS:PomBase.::GO:0016887; F:ATPase activity; ISS:PomBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0016226; P:iron-sulfur cluster assembly; ISS:PomBase.
952A7UVN1    382   WUHO_ANOGA tRNA (guanine-N(7)-)-methyltransfe...780.43     37.4     33     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
953A3LNW3    302   SEC13_PICST Protein transport protein SEC13 O...2880.43     37     24     39GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
954Q9BQ67    446   GRWD1_HUMAN Glutamate-rich WD repeat-containi...1760.43     37.4     22     43GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
955A1CJY4    340   EIF3I_ASPCL Eukaryotic translation initiation...520.44     37.4     33     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
956O13923    601   CORO_SCHPO Coronin-like protein crn1 OS=Schiz...1390.45     37.4     24     40GO:0030479; C:actin cortical patch; IDA:PomBase.::GO:0005826; C:actomyosin contractile ring; IDA:PomBase.::GO:0005885; C:Arp2/3 protein complex; ISS:RefGenome.::GO:0051286; C:cell tip; IDA:PomBase.
GO:0051015; F:actin filament binding; ISS:RefGenome.
GO:0051666; P:actin cortical patch localization; ISS:RefGenome.::GO:0051017; P:actin filament bundle assembly; TAS:PomBase.::GO:0030041; P:actin filament polymerization; NAS:PomBase.::GO:0034316; P:negative regulation of Arp2/3 complex-mediated actin nucleation; ISS:RefGenome.
957O94319    297   SEC13_SCHPO Protein transport protein sec13 O...2580.45     37     24     39GO:0030127; C:COPII vesicle coat; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; ISS:PomBase.::GO:0005886; C:plasma membrane; ISS:PomBase.
GO:0071937; P:barrier septum assembly involved in cell cycle cytokinesis; IMP:PomBase.::GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006999; P:nuclear pore organization; ISS:PomBase.
958A3LVM1    361   CIAO1_PICST Probable cytosolic iron-sulfur pr...2024.6     33.9     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
959Q0V320    332   EIF3I_PHANO Eukaryotic translation initiation...500.46     37     30     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
960O22607    507   MSI4_ARATH WD-40 repeat-containing protein MS...823.7     34.7     29     46GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.
GO:0046872; F:metal ion binding; IDA:TAIR.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IMP:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010224; P:response to UV-B; IEP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
961O16519    620   GAD1_CAEEL Gastrulation defective protein 1 O...1680.47     37.4     24     42
GO:0005515; F:protein binding; IPI:IntAct.
GO:0042074; P:cell migration involved in gastrulation; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0000132; P:establishment of mitotic spindle orientation; IMP:WormBase.::GO:0007346; P:regulation of mitotic cell cycle; IMP:WormBase.
records
Previous ‹‹ ›› Next Total records: 1000 931 - 960
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::