Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL213C
Length:
715
Number of sequences:
5887
Description:
YKL213C DOA1 SGDID:S000001696, Chr XI from 34107-31960, Genome Release 64-1-1, reverse complement, Verified ORF, "WD repeat protein required for ubiquitin-mediated protein degradation, forms complex with Cdc48p, plays a role in controlling cellular ubiquitin concentration; also promotes efficient NHEJ in postdiauxic/stationary phase"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
901Q32KQ2    358   WDR53_BOVIN WD repeat-containing protein 53 O...2180.24     38.1     23     42
902Q9USR0    404   CKN1_SCHPO DNA excision repair protein ckn1 O...1092.1     35     26     42GO:0005829; C:cytosol; IDA:PomBase.::GO:0070912; C:Ddb1-Ckn1 complex; IDA:PomBase.
GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:PomBase.
903Q9LRZ0    1131   TPR2_ARATH Topless-related protein 2 OS=Arabi...870.44     37.7     31     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:TAIR.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
904Q6ED65    1977   EMAL5_RAT Echinoderm microtubule-associated p...1590.25     38.5     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
905A2AKB9    566   DCA10_MOUSE DDB1- and CUL4-associated factor ...820.25     38.1     35     52GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
906A4IIX9    494   WDR37_XENTR WD repeat-containing protein 37 O...2120.25     38.1     24     39
907A2QI22    490   YTM1_ASPNC Ribosome biogenesis protein ytm1 O...1266.2     33.9     22     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
908Q0CCS0    422   CIAO1_ASPTN Probable cytosolic iron-sulfur pr...1680.26     38.1     26     43
909Q9SU78    487   MSI5_ARATH WD-40 repeat-containing protein MS...2120.26     38.1     24     38GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
910Q20059    683   WDR48_CAEEL WD repeat-containing protein 48 h...2230.39     37.7     23     40
911Q8VZY7    461   FIE1_MAIZE Polycomb group protein FIE1 OS=Zea...600.27     38.1     38     50
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
912A4R7U3    446   CIAO1_MAGO7 Probable cytosolic iron-sulfur pr...690.27     38.1     32     58
913Q8AVS9    457   DCA10_XENLA DDB1- and CUL4-associated factor ...820.27     38.1     35     50GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
914Q8NA23    367   WDR31_HUMAN WD repeat-containing protein 31 O...891     36.2     25     47
915P42935    788   ELP2_YEAST Elongator complex protein 2 OS=Sac...398.1     33.5     41     59GO:0005737; C:cytoplasm; IDA:SGD.::GO:0033588; C:Elongator holoenzyme complex; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0032447; P:protein urmylation; IMP:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0002098; P:tRNA wobble uridine modification; IMP:SGD.
916Q6FVJ1    1336   RTC1_CANGA Restriction of telomere capping pr...1750.28     38.5     25     39GO:0005773; C:vacuole; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
917Q5XI13    445   GRWD1_RAT Glutamate-rich WD repeat-containing...1760.29     38.1     22     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
918Q05BV3    1969   EMAL5_HUMAN Echinoderm microtubule-associated...1590.29     38.5     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
919Q04725    743   TLE2_HUMAN Transducin-like enhancer protein 2...1410.29     38.1     26     41GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.
GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0009887; P:organ morphogenesis; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
920Q9WVB2    767   TLE2_MOUSE Transducin-like enhancer protein 2...1410.29     38.1     26     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
921Q8BQM8    1977   EMAL5_MOUSE Echinoderm microtubule-associated...1590.3     38.5     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
922O42469    767   TLE1_XENLA Transducin-like enhancer protein 1...1410.3     38.1     26     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
923O43379    1518   WDR62_HUMAN WD repeat-containing protein 62 O...2050.3     38.1     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0000922; C:spindle pole; IDA:UniProtKB.
GO:0021987; P:cerebral cortex development; IMP:UniProtKB.::GO:0022008; P:neurogenesis; IMP:UniProtKB.
924Q9D1M0    322   SEC13_MOUSE Protein SEC13 homolog OS=Mus musc...930.31     37.7     31     52GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0031080; C:Nup107-160 complex; ISS:UniProtKB.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
925Q54W52    463   WDR12_DICDI Ribosome biogenesis protein WDR12...2800.32     37.7     23     38GO:0005730; C:nucleolus; ISS:dictyBase.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0042273; P:ribosomal large subunit biogenesis; ISS:dictyBase.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
926Q759L2    346   EIF3I_ASHGO Eukaryotic translation initiation...760.32     37.7     28     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
927A1CXL0    488   YTM1_NEOFI Ribosome biogenesis protein ytm1 O...710.57     37     31     52GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
928Q9D5R2    567   WDR20_MOUSE WD repeat-containing protein 20 O...650.33     37.7     31     55
929B4GIU9    785   BOP1_DROPE Ribosome biogenesis protein BOP1 h...580.34     38.1     34     57GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
930Q5QP82    559   DCA10_HUMAN DDB1- and CUL4-associated factor ...820.34     37.7     35     52GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.
931Q28XF0    786   BOP1_DROPS Ribosome biogenesis protein BOP1 h...580.35     38.1     34     57GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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