Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL213C
Length:
715
Number of sequences:
5887
Description:
YKL213C DOA1 SGDID:S000001696, Chr XI from 34107-31960, Genome Release 64-1-1, reverse complement, Verified ORF, "WD repeat protein required for ubiquitin-mediated protein degradation, forms complex with Cdc48p, plays a role in controlling cellular ubiquitin concentration; also promotes efficient NHEJ in postdiauxic/stationary phase"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
871Q03177    834   YMZ2_YEAST WD repeat-containing protein YMR10...770.15     39.3     39     53
872Q9Z2K5    326   LST8_RAT Target of rapamycin complex subunit ...1056.4     33.5     27     41GO:0005829; C:cytosol; IDA:RGD.
873A0JP70    1848   WDR90_XENTR WD repeat-containing protein 90 O...2694.6     34.3     18     39
874P55735    322   SEC13_HUMAN Protein SEC13 homolog OS=Homo sap...930.16     38.5     32     52GO:0005829; C:cytosol; TAS:Reactome.::GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome.::GO:0012507; C:ER to Golgi transport vesicle membrane; TAS:Reactome.::GO:0031080; C:Nup107-160 complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0002474; P:antigen processing and presentation of peptide antigen via MHC class I; TAS:Reactome.::GO:0048208; P:COPII vesicle coating; TAS:Reactome.::GO:0006886; P:intracellular protein transport; NAS:UniProtKB.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0043687; P:post-translational protein modification; TAS:Reactome.::GO:0018279; P:protein N-linked glycosylation via asparagine; TAS:Reactome.
875Q09373    507   FZY1_CAEEL WD repeat-containing protein fzy-1...1350.16     38.9     27     42GO:0000793; C:condensed chromosome; IDA:WormBase.::GO:0005737; C:cytoplasm; IDA:WormBase.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0007091; P:mitotic metaphase/anaphase transition; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
876Q496Z0    821   ELP2_RAT Elongator complex protein 2 OS=Rattu...4720.17     38.9     24     37GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; ISS:UniProtKB.
GO:0061133; F:endopeptidase activator activity; ISS:UniProtKB.
GO:0043248; P:proteasome assembly; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.
877Q7RZF5    304   SEC13_NEUCR Protein transport protein sec-13 ...467.7     33.1     43     57GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
878Q5FW06    457   DCA10_XENTR DDB1- and CUL4-associated factor ...800.17     38.9     36     51GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
879B3M1G0    481   WDR55_DROAN WD repeat-containing protein 55 h...850.99     36.2     27     53
880Q2UQ34    335   EIF3I_ASPOR Eukaryotic translation initiation...1600.17     38.5     24     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
881Q3ZCC9    322   SEC13_BOVIN Protein SEC13 homolog OS=Bos taur...930.19     38.5     32     52GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0031080; C:Nup107-160 complex; ISS:UniProtKB.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
882Q91VU6    549   DCA11_MOUSE DDB1- and CUL4-associated factor ...2480.19     38.5     23     42GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
883Q13610    501   PWP1_HUMAN Periodic tryptophan protein 1 homo...1630.19     38.5     24     40GO:0005634; C:nucleus; TAS:ProtInc.
GO:0006351; P:transcription, DNA-dependent; TAS:ProtInc.
884Q54H44    325   WDR83_DICDI WD repeat domain-containing prote...1070.19     38.5     31     50GO:0005737; C:cytoplasm; ISS:UniProtKB.
885Q7Z5U6    358   WDR53_HUMAN WD repeat-containing protein 53 O...2180.19     38.5     23     42
886Q9C1X1    854   PWP2_SCHPO Periodic tryptophan protein 2 homo...1425.8     33.9     27     44GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
887Q54PE0    922   PWP2_DICDI Periodic tryptophan protein 2 homo...2070.2     38.9     22     39GO:0005829; C:cytosol; ISS:dictyBase.::GO:0005730; C:nucleolus; ISS:dictyBase.
GO:0030515; F:snoRNA binding; ISS:dictyBase.
GO:0006364; P:rRNA processing; ISS:dictyBase.
888B0W517    425   WDR12_CULQU Ribosome biogenesis protein WDR12...2930.44     37.4     23     39GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
889Q8VZY6    379   FIE2_MAIZE Polycomb group protein FIE2 OS=Zea...870.21     38.5     31     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
890Q05AM5    821   ELP2_DANRE Elongator complex protein 2 OS=Dan...1550.66     37     28     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; ISS:UniProtKB.
GO:0061133; F:endopeptidase activator activity; ISS:UniProtKB.
GO:0043248; P:proteasome assembly; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.
891Q810D6    446   GRWD1_MOUSE Glutamate-rich WD repeat-containi...1770.21     38.5     23     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
892Q4P553    485   HAT2_USTMA Histone acetyltransferase type B s...860.21     38.5     27     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
893Q0CLJ4    483   YTM1_ASPTN Ribosome biogenesis protein ytm1 O...2574.6     34.3     21     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
894P14197    478   AAC3_DICDI WD repeat-containing protein AAC3 ...2340.22     38.5     24     39
895Q3U3T8    1523   WDR62_MOUSE WD repeat-containing protein 62 O...2050.22     38.9     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0021987; P:cerebral cortex development; ISS:UniProtKB.
896A1CQL6    453   CIAO1_ASPCL Probable cytosolic iron-sulfur pr...1800.23     38.1     26     42
897O17468    1047   HIRA_DROME Protein HIRA homolog OS=Drosophila...2434.1     34.7     25     42GO:0001673; C:male germ cell nucleus; IDA:UniProtKB.
GO:0003682; F:chromatin binding; IDA:UniProtKB.
GO:0006336; P:DNA replication-independent nucleosome assembly; IMP:FlyBase.::GO:0035042; P:fertilization, exchange of chromosomal proteins; IMP:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
898B3MHX6    793   BOP1_DROAN Ribosome biogenesis protein BOP1 h...580.24     38.5     36     57GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
899O14053    902   YC47_SCHPO Uncharacterized WD repeat-containi...1600.24     38.5     24     44GO:0032153; C:cell division site; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; NAS:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.::GO:0032040; C:small-subunit processome; IEA:InterPro.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
900Q9FNZ1    443   C3H63_ARATH Zinc finger CCCH domain-containin...2678     33.5     24     37
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
901Q32KQ2    358   WDR53_BOVIN WD repeat-containing protein 53 O...2180.24     38.1     23     42
records
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