Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL213C
Length:
715
Number of sequences:
5887
Description:
YKL213C DOA1 SGDID:S000001696, Chr XI from 34107-31960, Genome Release 64-1-1, reverse complement, Verified ORF, "WD repeat protein required for ubiquitin-mediated protein degradation, forms complex with Cdc48p, plays a role in controlling cellular ubiquitin concentration; also promotes efficient NHEJ in postdiauxic/stationary phase"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
811Q149M9    1564   NWD1_HUMAN NACHT and WD repeat domain-contain...860.055     40.8     27     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
812Q5M9G8    549   DCA11_RAT DDB1- and CUL4-associated factor 11...2480.055     40.4     23     42GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
813O60161    710   UTP4_SCHPO U3 small nucleolar RNA-associated ...1160.057     40.4     27     45GO:0032040; C:small-subunit processome; ISS:PomBase.::GO:0005819; C:spindle; IDA:PomBase.::GO:0034455; C:t-UTP complex; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.::GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; ISS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
814Q9P7C0    524   YKU5_SCHPO Uncharacterized WD repeat-containi...1420.057     40.4     23     44GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
815A2QPW4    412   CIAO1_ASPNC Probable cytosolic iron-sulfur pr...2657     33.5     21     38
816O13168    535   TLE1_DANRE Protein groucho-1 OS=Danio rerio (...740.06     40.4     34     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
817Q8MYE8    425   PAAF1_DICDI Probable proteasomal ATPase-assoc...1200.062     40     30     45GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
818Q96KV7    1748   WDR90_HUMAN WD repeat-containing protein 90 O...1670.064     40.4     24     40
819Q5SQM0    1958   EMAL6_MOUSE Echinoderm microtubule-associated...1564.6     34.3     25     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
820Q9JIT3    764   TLE3_RAT Transducin-like enhancer protein 3 O...740.066     40.4     34     53GO:0005634; C:nucleus; IDA:BHF-UCL.
GO:0005515; F:protein binding; IPI:BHF-UCL.
GO:0006355; P:regulation of transcription, DNA-dependent; IDA:RGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
821Q9BVC4    326   LST8_HUMAN Target of rapamycin complex subuni...930.98     36.2     30     46GO:0005829; C:cytosol; TAS:Reactome.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0008543; P:fibroblast growth factor receptor signaling pathway; TAS:Reactome.::GO:0008286; P:insulin receptor signaling pathway; TAS:Reactome.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0048015; P:phosphatidylinositol-mediated signaling; TAS:Reactome.::GO:0032008; P:positive regulation of TOR signaling cascade; IMP:UniProtKB.::GO:0032956; P:regulation of actin cytoskeleton organization; IMP:UniProtKB.::GO:0031295; P:T cell costimulation; TAS:Reactome.
822Q04726    772   TLE3_HUMAN Transducin-like enhancer protein 3...740.067     40.4     34     53GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0009887; P:organ morphogenesis; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
823Q08122    772   TLE3_MOUSE Transducin-like enhancer protein 3...740.069     40     34     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
824Q6ZPG2    1874   WDR90_MOUSE WD repeat-containing protein 90 O...2330.07     40.4     24     39
825Q7ZYQ6    445   DCA13_XENLA DDB1- and CUL4-associated factor ...2020.071     40     24     41GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
826P91341    910   PWP2_CAEEL Periodic tryptophan protein 2 homo...1701.1     36.2     26     44
GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.
827Q9Y2I8    494   WDR37_HUMAN WD repeat-containing protein 37 O...2110.073     40     22     40
828P38328    384   ARPC1_YEAST Actin-related protein 2/3 complex...1110.077     39.7     28     49GO:0030479; C:actin cortical patch; IEA:UniProtKB-SubCell.::GO:0005885; C:Arp2/3 protein complex; IDA:SGD.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0045010; P:actin nucleation; IDA:SGD.::GO:0000001; P:mitochondrion inheritance; TAS:SGD.
829Q6ZMW3    1958   EMAL6_HUMAN Echinoderm microtubule-associated...1566.1     33.9     25     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
830B4PU14    499   WDR55_DROYA WD repeat-containing protein 55 h...891.4     35.8     26     53
831Q6PA72    326   LST8_XENLA Target of rapamycin complex subuni...931.3     35.8     30     48GO:0005737; C:cytoplasm; ISS:UniProtKB.
832Q3SZD4    432   WDR18_BOVIN WD repeat-containing protein 18 O...1111.3     35.8     32     45
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
833Q8N9V3    476   WSDU1_HUMAN WD repeat, SAM and U-box domain-c...1830.32     37.7     26     42GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
834Q6NV31    313   WDR82_DANRE WD repeat-containing protein 82 O...1690.084     39.3     26     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
835Q2UG43    294   SEC13_ASPOR Protein transport protein sec13 O...2760.12     38.9     21     42GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
836B4KE10    506   WDR55_DROMO WD repeat-containing protein 55 h...930.085     39.7     27     52
837Q5U4D9    341   THOC6_MOUSE THO complex subunit 6 homolog OS=...630.085     39.3     30     49
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
838Q5I0B4    326   LST8_XENTR Target of rapamycin complex subuni...931.3     35.8     30     48GO:0005737; C:cytoplasm; ISS:UniProtKB.
839Q5B8Y3    336   EIF3I_EMENI Eukaryotic translation initiation...523.4     34.3     31     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
840Q8T088    498   WDR55_DROME WD repeat-containing protein 55 h...890.66     37     27     53
841B3P4F8    498   WDR55_DROER WD repeat-containing protein 55 h...891.5     35.8     26     53
records
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