Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL213C
Length:
715
Number of sequences:
5887
Description:
YKL213C DOA1 SGDID:S000001696, Chr XI from 34107-31960, Genome Release 64-1-1, reverse complement, Verified ORF, "WD repeat protein required for ubiquitin-mediated protein degradation, forms complex with Cdc48p, plays a role in controlling cellular ubiquitin concentration; also promotes efficient NHEJ in postdiauxic/stationary phase"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
781Q4I7X1    612   PFS2_GIBZE Polyadenylation factor subunit 2 O...1800.026     41.6     27     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
782B3RNR8    313   CIAO1_TRIAD Probable cytosolic iron-sulfur pr...447.9     33.1     36     57
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
783Q9R1A8    733   RFWD2_MOUSE E3 ubiquitin-protein ligase RFWD2...1630.027     41.6     26     45GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro.
784Q8NHY2    731   RFWD2_HUMAN E3 ubiquitin-protein ligase RFWD2...1630.028     41.6     26     45GO:0005813; C:centrosome; IDA:HPA.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005925; C:focal adhesion; IDA:HPA.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006977; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; TAS:Reactome.
785Q04491    297   SEC13_YEAST Protein transport protein SEC13 O...1900.43     37     26     43GO:0030127; C:COPII vesicle coat; IDA:SGD.::GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0031080; C:Nup107-160 complex; IDA:SGD.::GO:0035859; C:Seh1-associated complex; IDA:SGD.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; IDA:SGD.
GO:0090114; P:COPII-coated vesicle budding; IDA:SGD.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006999; P:nuclear pore organization; IMP:SGD.::GO:0043547; P:positive regulation of GTPase activity; IDA:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
786Q2GXT0    484   YTM1_CHAGB Ribosome biogenesis protein YTM1 O...1413.3     34.7     26     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
787B2VZH2    460   YTM1_PYRTR Ribosome biogenesis protein ytm1 O...1230.029     41.2     30     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
788Q58DC2    494   DCAF4_BOVIN DDB1- and CUL4-associated factor ...880.03     41.2     31     50GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
789Q5E9I8    546   DCA11_BOVIN DDB1- and CUL4-associated factor ...2480.032     41.2     23     42
790Q0CHM0    309   SEC13_ASPTN Protein transport protein sec13 O...440.095     39.3     48     61GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
791A1D3I2    462   CIAO1_NEOFI Probable cytosolic iron-sulfur pr...1960.032     41.2     25     40
792Q640J6    313   WD82A_XENLA WD repeat-containing protein 82-A...900.65     36.6     22     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
793Q08924    1013   WDR6_YEAST Regulator of Ty1 transposition pro...960.25     38.5     28     48GO:0005768; C:endosome; IDA:SGD.
GO:0032456; P:endocytic recycling; IMP:SGD.
794Q2GSM6    290   SEC13_CHAGB Protein transport protein SEC13 O...800.2     38.1     33     56GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
795Q6BLS5    466   YTM1_DEBHA Ribosome biogenesis protein YTM1 O...540.038     40.8     37     57GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
796Q6FNV4    298   SC131_CANGA Protein transport protein SEC13-1...2700.039     40.4     23     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
797B4NER4    419   WUHO_DROWI tRNA (guanine-N(7)-)-methyltransfe...1550.04     40.8     26     47GO:0001674; C:female germ cell nucleus; ISS:UniProtKB.::GO:0001673; C:male germ cell nucleus; ISS:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
798O13166    761   TLE2_DANRE Protein groucho-2 OS=Danio rerio (...1100.041     40.8     29     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
799B4N984    504   WDR55_DROWI WD repeat-containing protein 55 h...832.1     35.4     27     49
800Q2HJH6    358   SNR40_BOVIN U5 small nuclear ribonucleoprotei...1734.8     33.9     24     42GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
801Q17QU5    326   LST8_BOVIN Target of rapamycin complex subuni...1055.7     33.5     27     41GO:0005737; C:cytoplasm; ISS:UniProtKB.
802A5DHD2    382   CIAO1_PICGU Probable cytosolic iron-sulfur pr...2540.046     40.4     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
803Q5R650    495   WDR37_PONAB WD repeat-containing protein 37 O...2110.049     40.4     22     40
804A9VDW7    506   CIAO1_MONBE Probable cytosolic iron-sulfur pr...2730.049     40.4     26     38
805Q6FJ73    337   CIAO1_CANGA Probable cytosolic iron-sulfur pr...792.5     34.7     38     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
806Q32SG6    964   HIRA_MAIZE Protein HIRA OS=Zea mays (Maize). ...910.049     40.8     35     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
807Q9D0I6    474   WSDU1_MOUSE WD repeat, SAM and U-box domain-c...1631.4     35.8     25     42GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
808Q9VU68    608   WDR1_DROME Actin-interacting protein 1 OS=Dro...1570.051     40.4     22     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IDA:UniProtKB.
GO:0003779; F:actin binding; ISS:FlyBase.
GO:0030042; P:actin filament depolymerization; IMP:FlyBase.::GO:0001736; P:establishment of planar polarity; IMP:UniProtKB.::GO:0035317; P:imaginal disc-derived wing hair organization; IMP:FlyBase.::GO:0006911; P:phagocytosis, engulfment; IMP:FlyBase.::GO:0030834; P:regulation of actin filament depolymerization; IMP:UniProtKB.::GO:0045214; P:sarcomere organization; IMP:FlyBase.
809Q6AY87    341   THOC6_RAT THO complex subunit 6 homolog OS=Ra...630.051     40     30     49
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
810B4JWS7    385   WUHO_DROGR tRNA (guanine-N(7)-)-methyltransfe...1740.052     40.4     22     44GO:0001674; C:female germ cell nucleus; ISS:UniProtKB.::GO:0001673; C:male germ cell nucleus; ISS:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
811Q149M9    1564   NWD1_HUMAN NACHT and WD repeat domain-contain...860.055     40.8     27     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
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