Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL213C
Length:
715
Number of sequences:
5887
Description:
YKL213C DOA1 SGDID:S000001696, Chr XI from 34107-31960, Genome Release 64-1-1, reverse complement, Verified ORF, "WD repeat protein required for ubiquitin-mediated protein degradation, forms complex with Cdc48p, plays a role in controlling cellular ubiquitin concentration; also promotes efficient NHEJ in postdiauxic/stationary phase"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
751A8WVX8    327   EIF3I_CAEBR Eukaryotic translation initiation...1420.015     41.6     25     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
752Q6BIR1    297   SEC13_DEBHA Protein transport protein SEC13 O...2680.016     41.6     23     43GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
753A6R3K5    490   YTM1_AJECN Ribosome biogenesis protein YTM1 O...1150.016     42     30     51GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
754Q6CGP9    532   PFS2_YARLI Polyadenylation factor subunit 2 O...2660.3     38.1     23     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
755Q8CBE3    496   WDR37_MOUSE WD repeat-containing protein 37 O...2110.016     42     23     41
756A5DVY3    350   EIF3I_LODEL Eukaryotic translation initiation...2600.016     41.6     26     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
757B7QKS1    315   CIAO1_IXOSC Probable cytosolic iron-sulfur pr...2150.077     39.7     26     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
758Q27GK7    1135   TPR4_ARATH Topless-related protein 4 OS=Arabi...1760.017     42.4     24     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:TAIR.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
759Q6PE01    358   SNR40_MOUSE U5 small nuclear ribonucleoprotei...1745.2     33.9     25     40
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
760Q28DW0    333   CIAO1_XENTR Probable cytosolic iron-sulfur pr...2230.018     41.6     28     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
761A0AUS0    487   WSDU1_DANRE WD repeat, SAM and U-box domain-c...1840.024     41.6     24     43GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
762E9Q349    535   WDR25_MOUSE WD repeat-containing protein 25 O...1360.018     42     28     43
763Q9UTN4    509   PFS2_SCHPO Polyadenylation factor subunit 2 O...1930.15     38.9     26     41GO:0005829; C:cytosol; IDA:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase.::GO:2000045; P:regulation of G1/S transition of mitotic cell cycle; IMP:PomBase.
764Q5FVB6    396   WDR4_XENTR tRNA (guanine-N(7)-)-methyltransfe...910.019     41.6     31     52GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006400; P:tRNA modification; ISS:UniProtKB.
765O02482    612   UNC37_CAEEL Transcription factor unc-37 OS=Ca...1440.02     42     27     42GO:0005634; C:nucleus; IDA:WormBase.
GO:0008134; F:transcription factor binding; IPI:WormBase.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048477; P:oogenesis; IMP:WormBase.::GO:0035046; P:pronuclear migration; IMP:WormBase.::GO:0050770; P:regulation of axonogenesis; IMP:WormBase.::GO:0001505; P:regulation of neurotransmitter levels; IDA:WormBase.::GO:0050803; P:regulation of synapse structure and activity; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
766Q148I1    392   PAAF1_BOVIN Proteasomal ATPase-associated fac...750.24     38.1     33     49GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
767F4I1S7    838   ELP2_ARATH Elongator complex protein 2 OS=Ara...2780.021     42     21     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0033588; C:Elongator holoenzyme complex; IDA:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016746; F:transferase activity, transferring acyl groups; IEA:UniProtKB-KW.
GO:0009738; P:abscisic acid mediated signaling pathway; IEA:UniProtKB-KW.::GO:0006952; P:defense response; IEA:UniProtKB-KW.::GO:0031538; P:negative regulation of anthocyanin metabolic process; IMP:UniProtKB.::GO:0008284; P:positive regulation of cell proliferation; IMP:UniProtKB.::GO:0031349; P:positive regulation of defense response; IMP:UniProtKB.::GO:2000024; P:regulation of leaf development; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006979; P:response to oxidative stress; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
768Q4WNK7    306   SEC13_ASPFU Protein transport protein sec13 O...440.084     39.3     48     61GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
769B5DMC9    396   WUHO_DROPS tRNA (guanine-N(7)-)-methyltransfe...1550.022     41.6     23     44GO:0001674; C:female germ cell nucleus; ISS:UniProtKB.::GO:0001673; C:male germ cell nucleus; ISS:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
770Q9H2Y7    1883   ZF106_HUMAN Zinc finger protein 106 homolog O...1203.1     35     27     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
771Q62441    773   TLE4_MOUSE Transducin-like enhancer protein 4...1640.022     42     25     43GO:0005634; C:nucleus; IC:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0070491; F:repressing transcription factor binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IDA:MGI.
772C4YPI7    486   LIS1_CANAW Nuclear distribution protein PAC1 ...1040.24     38.1     28     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
773Q5A7Q6    486   LIS1_CANAL Nuclear distribution protein PAC1 ...1040.24     38.1     28     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
774P93397    377   GBB1_TOBAC Guanine nucleotide-binding protein...1710.49     37     26     43
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
775Q9JMJ2    410   FBXW4_MOUSE F-box/WD repeat-containing protei...1830.023     41.6     23     44
GO:0051216; P:cartilage development; IMP:MGI.::GO:0042733; P:embryonic digit morphogenesis; IMP:MGI.::GO:0002053; P:positive regulation of mesenchymal cell proliferation; IMP:MGI.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
776Q4IBR4    1046   HIR1_GIBZE Protein HIR1 OS=(Wheat head blight...3670.023     42     25     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
777Q96DI7    357   SNR40_HUMAN U5 small nuclear ribonucleoprotei...1736.4     33.5     24     42GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005732; C:small nucleolar ribonucleoprotein complex; NAS:UniProtKB.::GO:0005682; C:U5 snRNP; TAS:ProtInc.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.
778Q04727    773   TLE4_HUMAN Transducin-like enhancer protein 4...1640.024     41.6     25     43GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
779O42478    772   TLE4_XENLA Transducin-like enhancer protein 4...1640.025     41.6     25     43GO:0017053; C:transcriptional repressor complex; IPI:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IGI:UniProtKB.
GO:0001707; P:mesoderm formation; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
780A7TLU2    347   CIAO1_VANPO Probable cytosolic iron-sulfur pr...2433.7     34.3     23     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
781Q4I7X1    612   PFS2_GIBZE Polyadenylation factor subunit 2 O...1800.026     41.6     27     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
records
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