Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL213C
Length:
715
Number of sequences:
5887
Description:
YKL213C DOA1 SGDID:S000001696, Chr XI from 34107-31960, Genome Release 64-1-1, reverse complement, Verified ORF, "WD repeat protein required for ubiquitin-mediated protein degradation, forms complex with Cdc48p, plays a role in controlling cellular ubiquitin concentration; also promotes efficient NHEJ in postdiauxic/stationary phase"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
721A7TH19    347   EIF3I_VANPO Eukaryotic translation initiation...3450.008     42.7     21     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
722Q99LL5    501   PWP1_MOUSE Periodic tryptophan protein 1 homo...1630.009     43.1     25     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
723Q9C2I5    487   YTM1_NEUCR Ribosome biogenesis protein ytm-1 ...2690.018     42     22     36GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
724Q5APF0    466   YTM1_CANAL Ribosome biogenesis protein YTM1 O...540.009     42.7     39     59GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0030447; P:filamentous growth; IMP:CGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
725Q9Y0T2    1247   FBXA_DICDI F-box/WD repeat-containing protein...3111.2     36.2     24     41GO:0019005; C:SCF ubiquitin ligase complex; IDA:dictyBase.
GO:0005515; F:protein binding; IPI:dictyBase.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:dictyBase.
GO:0031154; P:culmination involved in sorocarp development; IMP:dictyBase.::GO:0045595; P:regulation of cell differentiation; IMP:dictyBase.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IMP:dictyBase.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:dictyBase.
726Q54WA3    316   PEX7_DICDI Peroxisomal targeting signal 2 rec...2440.009     42.4     22     42GO:0005777; C:peroxisome; ISS:dictyBase.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; ISS:dictyBase.
GO:0016558; P:protein import into peroxisome matrix; IEA:InterPro.
727A8QB65    433   WDR12_BRUMA Ribosome biogenesis protein WDR12...2663     34.7     22     42GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
728Q09150    302   REC14_SCHPO Meiotic recombination protein rec...1490.009     42.4     22     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0055087; C:Ski complex; ISS:PomBase.
GO:0006402; P:mRNA catabolic process; ISS:PomBase.::GO:0007131; P:reciprocal meiotic recombination; IMP:PomBase.
729Q5XJS5    323   THOC6_DANRE THO complex subunit 6 homolog OS=...580.01     42.4     36     53
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
730Q62440    770   TLE1_MOUSE Transducin-like enhancer protein 1...1640.01     43.1     26     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:MGI.
GO:0043124; P:negative regulation of I-kappaB kinase/NF-kappaB cascade; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
731O94527    809   YBU3_SCHPO Uncharacterized WD repeat-containi...1470.01     43.1     32     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
732P0CS38    881   HIR1_CRYNJ Protein HIR1 OS=ATCC MYA-565) (Fil...1520.01     43.1     26     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
733P0CS39    881   HIR1_CRYNB Protein HIR1 OS=(Filobasidiella ne...1520.01     43.1     26     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
734Q965S8    327   EIF3I_CAEEL Eukaryotic translation initiation...1420.01     42.4     27     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
735B6K1G6    616   CFD1_SCHJY Probable cytosolic Fe-S cluster as...1580.73     37     25     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
736Q04724    770   TLE1_HUMAN Transducin-like enhancer protein 1...1640.011     42.7     26     43
GO:0001106; F:RNA polymerase II transcription corepressor activity; IDA:BHF-UCL.::GO:0008134; F:transcription factor binding; IDA:UniProtKB.
GO:0043124; P:negative regulation of I-kappaB kinase/NF-kappaB cascade; IDA:UniProtKB.::GO:0030178; P:negative regulation of Wnt receptor signaling pathway; NAS:UniProtKB.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0009887; P:organ morphogenesis; TAS:ProtInc.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
737O94967    919   WDR47_HUMAN WD repeat-containing protein 47 O...1690.011     42.7     27     42
738Q8WV16    495   DCAF4_HUMAN DDB1- and CUL4-associated factor ...920.011     42.4     32     48GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.
739Q5R7H5    546   DCA11_PONAB DDB1- and CUL4-associated factor ...2480.012     42.7     23     42GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
740Q6NVS5    445   DCA13_XENTR DDB1- and CUL4-associated factor ...1980.012     42.4     25     42GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
741Q8CGF6    920   WDR47_MOUSE WD repeat-containing protein 47 O...1790.012     42.7     27     42
742A1CGS0    295   SEC13_ASPCL Protein transport protein sec13 O...440.39     37.4     43     61GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
743Q8BFQ4    313   WDR82_MOUSE WD repeat-containing protein 82 O...1690.013     42     27     43GO:0000785; C:chromatin; ISS:UniProtKB.::GO:0072357; C:PTW/PP1 phosphatase complex; ISS:UniProtKB.
744Q6UXN9    313   WDR82_HUMAN WD repeat-containing protein 82 O...1690.013     42     27     43GO:0000785; C:chromatin; IDA:UniProtKB.::GO:0072357; C:PTW/PP1 phosphatase complex; IDA:UniProtKB.::GO:0048188; C:Set1C/COMPASS complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051568; P:histone H3-K4 methylation; IDA:UniProtKB.
745Q5RF51    357   SNR40_PONAB U5 small nuclear ribonucleoprotei...1733.1     34.7     24     42GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
746Q70M86    845   STRN_SORMK Striatin Pro11 OS=K-hell). GN=pro1...1060.014     42.4     27     48GO:0016020; C:membrane; IEA:UniProtKB-SubCell.::GO:0005624; C:membrane fraction; IDA:UniProtKB.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IMP:UniProtKB.::GO:0000909; P:sporocarp development involved in sexual reproduction; IMP:UniProtKB.
747Q2GTM8    341   EIF3I_CHAGB Eukaryotic translation initiation...720.049     40     31     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
748Q5ND34    887   WDR81_MOUSE WD repeat-containing protein 81 O...1100.014     42.4     25     45
GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB.
749O88466    1888   ZF106_MOUSE Zinc finger protein 106 OS=Mus mu...1202.7     35     28     48GO:0005829; C:cytosol; IDA:MGI.::GO:0005624; C:membrane fraction; IDA:MGI.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0001515; F:opioid peptide activity; IPI:MGI.::GO:0017124; F:SH3 domain binding; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008286; P:insulin receptor signaling pathway; IDA:MGI.
750Q6BZX5    298   SEC13_YARLI Protein transport protein SEC13 O...3170.015     41.6     21     37GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
751A8WVX8    327   EIF3I_CAEBR Eukaryotic translation initiation...1420.015     41.6     25     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
records
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