Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL213C
Length:
715
Number of sequences:
5887
Description:
YKL213C DOA1 SGDID:S000001696, Chr XI from 34107-31960, Genome Release 64-1-1, reverse complement, Verified ORF, "WD repeat protein required for ubiquitin-mediated protein degradation, forms complex with Cdc48p, plays a role in controlling cellular ubiquitin concentration; also promotes efficient NHEJ in postdiauxic/stationary phase"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
631Q5ZJH5    305   WDR61_CHICK WD repeat-containing protein 61 O...1930.028     40.8     25     45GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
632O54929    404   WSB2_MOUSE WD repeat and SOCS box-containing ...800.038     40.8     34     49
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
633Q5R5W8    340   GBB1_PONAB Guanine nucleotide-binding protein...1037.8     33.1     22     45
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
634P54311    340   GBB1_RAT Guanine nucleotide-binding protein G...1037.6     33.1     22     45GO:0005834; C:heterotrimeric G-protein complex; TAS:RGD.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0010659; P:cardiac muscle cell apoptotic process; IDA:MGI.::GO:0071456; P:cellular response to hypoxia; IDA:MGI.::GO:0007204; P:elevation of cytosolic calcium ion concentration; IMP:RGD.
635P62874    340   GBB1_MOUSE Guanine nucleotide-binding protein...1037.6     33.1     22     45GO:0005834; C:heterotrimeric G-protein complex; IPI:MGI.::GO:0001750; C:photoreceptor outer segment; IDA:MGI.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007200; P:activation of phospholipase C activity by G-protein coupled receptor protein signaling pathway coupled to IP3 second messenger; IDA:MGI.::GO:0008283; P:cell proliferation; IDA:MGI.::GO:0060041; P:retina development in camera-type eye; IMP:MGI.::GO:0050909; P:sensory perception of taste; IDA:MGI.
636P62873    340   GBB1_HUMAN Guanine nucleotide-binding protein...1037.6     33.1     22     45GO:0005834; C:heterotrimeric G-protein complex; IDA:MGI.::GO:0005624; C:membrane fraction; ISS:BHF-UCL.
GO:0003924; F:GTPase activity; IDA:MGI.::GO:0051020; F:GTPase binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007191; P:activation of adenylate cyclase activity by dopamine receptor signaling pathway; ISS:BHF-UCL.::GO:0071870; P:cellular response to catecholamine stimulus; ISS:BHF-UCL.::GO:0071377; P:cellular response to glucagon stimulus; TAS:Reactome.::GO:0071380; P:cellular response to prostaglandin E stimulus; ISS:BHF-UCL.::GO:0006112; P:energy reserve metabolic process; TAS:Reactome.::GO:0007213; P:G-protein coupled acetylcholine receptor signaling pathway; TAS:ProtInc.::GO:0030168; P:platelet activation; TAS:Reactome.::GO:0007265; P:Ras protein signal transduction; TAS:ProtInc.::GO:0007268; P:synaptic transmission; TAS:Reactome.
637P62872    340   GBB1_CANFA Guanine nucleotide-binding protein...1037.6     33.1     22     45
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
638P62871    340   GBB1_BOVIN Guanine nucleotide-binding protein...1037.6     33.1     22     45GO:0005834; C:heterotrimeric G-protein complex; IDA:BHF-UCL.::GO:0005624; C:membrane fraction; IDA:BHF-UCL.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007191; P:activation of adenylate cyclase activity by dopamine receptor signaling pathway; IDA:BHF-UCL.::GO:0071870; P:cellular response to catecholamine stimulus; IDA:BHF-UCL.::GO:0071380; P:cellular response to prostaglandin E stimulus; IDA:BHF-UCL.
639Q4QR85    342   MEP50_RAT Methylosome protein 50 OS=Rattus no...1010.001     45.1     30     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
640C8ZH19    494   LIS1_YEAS8 Nuclear distribution protein PAC1 ...660.003     44.7     39     56GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
641Q5FVN8    476   WSDU1_RAT WD repeat, SAM and U-box domain-con...1810.072     40     25     41GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
642O22469    424   MSI3_ARATH WD-40 repeat-containing protein MS...2000.001     45.4     25     45GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
643B3N534    420   WDR12_DROER Ribosome biogenesis protein WDR12...1710.06     40     22     47GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
644Q6GMD2    305   WDR61_XENLA WD repeat-containing protein 61 O...2540.002     44.7     26     48GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
645B3MJV8    419   WDR12_DROAN Ribosome biogenesis protein WDR12...1710.15     38.9     20     48GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
646Q5F3D7    520   UTP15_CHICK U3 small nucleolar RNA-associated...2330.002     45.4     24     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
647Q9FKR9    472   C3H59_ARATH Zinc finger CCCH domain-containin...3140.002     45.4     26     40
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
648Q9UT85    507   YIPC_SCHPO Uncharacterized WD repeat-containi...720.99     36.2     32     49GO:0005829; C:cytosol; IDA:PomBase.::GO:0034657; C:GID complex; ISS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0045721; P:negative regulation of gluconeogenesis; ISS:PomBase.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:PomBase.
649Q6TMK6    340   GBB1_CRIGR Guanine nucleotide-binding protein...1243     34.7     30     42
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
650Q7ZW33    517   UTP15_DANRE U3 small nucleolar RNA-associated...1720.35     37.7     24     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
651Q9HAD4    459   WDR41_HUMAN WD repeat-containing protein 41 O...1540.024     41.6     26     42
652B4P116    420   WDR12_DROYA Ribosome biogenesis protein WDR12...1710.06     40     22     47GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
653Q5XUX1    488   FBXW9_HUMAN F-box/WD repeat-containing protei...2480.002     45.1     23     40
GO:0005515; F:protein binding; IPI:IntAct.
654Q58E77    313   WD82B_XENLA WD repeat-containing protein 82-B...1690.002     44.7     28     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
655Q54QU5    359   WDR89_DICDI WD repeat-containing protein 89 h...1403     34.7     26     41
656P38123    315   SWD3_YEAST COMPASS component SWD3 OS=Saccharo...2060.037     40.4     27     45GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0051568; P:histone H3-K4 methylation; IDA:SGD.::GO:0000723; P:telomere maintenance; IMP:SGD.
657Q0V8J1    406   WSB2_BOVIN WD repeat and SOCS box-containing ...1020.028     41.2     32     45
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
658B4MU54    423   WDR12_DROWI Ribosome biogenesis protein WDR12...1760.59     37     20     41GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
659Q4P8R5    814   MDV1_USTMA Mitochondrial division protein 1 O...1260.15     39.3     32     45GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
660P43254    675   COP1_ARATH E3 ubiquitin-protein ligase COP1 O...1750.002     45.1     26     44GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000152; C:nuclear ubiquitin ligase complex; TAS:TAIR.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0046283; P:anthocyanin metabolic process; IMP:TAIR.::GO:0006281; P:DNA repair; IMP:TAIR.::GO:0009649; P:entrainment of circadian clock; IMP:TAIR.::GO:0009640; P:photomorphogenesis; IGI:TAIR.::GO:0048573; P:photoperiodism, flowering; IMP:TAIR.::GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.::GO:0010119; P:regulation of stomatal movement; IMP:TAIR.::GO:0009641; P:shade avoidance; IMP:TAIR.::GO:0009647; P:skotomorphogenesis; TAS:TAIR.
661Q9WUM3    484   COR1B_MOUSE Coronin-1B OS=Mus musculus (Mouse...2010.002     45.1     24     42GO:0015629; C:actin cytoskeleton; IBA:RefGenome.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.
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