Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL213C
Length:
715
Number of sequences:
5887
Description:
YKL213C DOA1 SGDID:S000001696, Chr XI from 34107-31960, Genome Release 64-1-1, reverse complement, Verified ORF, "WD repeat protein required for ubiquitin-mediated protein degradation, forms complex with Cdc48p, plays a role in controlling cellular ubiquitin concentration; also promotes efficient NHEJ in postdiauxic/stationary phase"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
541A6ZZZ8    645   CAF4_YEAS7 CCR4-associated factor 4 OS=Saccha...681.1     36.2     35     49GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
542O60136    586   YNS5_SCHPO Uncharacterized WD repeat-containi...1830.0002     48.5     29     48GO:0032153; C:cell division site; IDA:PomBase.::GO:0051286; C:cell tip; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
543Q6PNB6    353   GBB5_RABIT Guanine nucleotide-binding protein...2640.001     45.4     22     36GO:0005634; C:nucleus; ISS:AgBase.::GO:0005886; C:plasma membrane; ISS:AgBase.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; ISS:AgBase.
544Q8SQS4    556   TAF5_ENCCU Transcription initiation factor TF...2070.0002     48.5     24     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
545P53024    289   SEC13_PICPG Protein transport protein SEC13 O...2630.0002     47.8     26     48GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
546Q6FWT9    467   LIS1_CANGA Nuclear distribution protein PAC1 ...1990.001     45.8     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
547Q6L4F8    336   GBLPB_ORYSJ Guanine nucleotide-binding protei...2140.0002     48.1     27     41
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
548Q5I0B9    622   ATG16_XENTR Autophagy-related protein 16 OS=X...2640.0002     48.5     23     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
549Q9ERF3    305   WDR61_MOUSE WD repeat-containing protein 61 O...1920.56     36.6     22     44GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
550P62884    312   GBLP_LEIIN Guanine nucleotide-binding protein...3000.072     39.7     24     40
551P62883    312   GBLP_LEICH Guanine nucleotide-binding protein...3000.072     39.7     24     40
552A5DST9    491   YTM1_LODEL Ribosome biogenesis protein YTM1 O...850.0002     48.1     33     53GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
553Q9JJA4    423   WDR12_MOUSE Ribosome biogenesis protein WDR12...2790.008     42.7     24     42GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:MGI.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0007219; P:Notch signaling pathway; IPI:MGI.
554Q17GR9    337   CIAO1_AEDAE Probable cytosolic iron-sulfur pr...401.7     35.4     33     65
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
555Q6CP71    452   PFS2_KLULA Polyadenylation factor subunit 2 O...1400.12     39.3     24     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
556Q9C270    899   PWP2_NEUCR Periodic tryptophan protein 2 homo...1212.4     35     25     45
557Q26544    301   WSL17_SCHMA WD repeat-containing protein SL1-...1081.8     35     26     44
558Q08706    341   GBB_LYMST Guanine nucleotide-binding protein ...1250.48     37     23     43
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
559Q6NX08    422   WDR12_DANRE Ribosome biogenesis protein wdr12...2300.001     45.8     24     39GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
560Q6CEW7    511   YTM1_YARLI Ribosome biogenesis protein YTM1 O...2543.1     34.7     23     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
561Q9FUY2    931   LEUNG_ARATH Transcriptional corepressor LEUNI...1262.2     35.4     32     48GO:0005634; C:nucleus; IDA:TAIR.
GO:0046982; F:protein heterodimerization activity; IPI:TAIR.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009908; P:flower development; IMP:TAIR.::GO:0080001; P:mucilage extrusion from seed coat; IMP:TAIR.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
562B4GDM7    335   CIAO1_DROPE Probable cytosolic iron-sulfur pr...350.49     37     37     66
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
563Q9DC48    579   PRP17_MOUSE Pre-mRNA-processing factor 17 OS=...2400.0002     48.1     22     44GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
564B4MY77    335   CIAO1_DROWI Probable cytosolic iron-sulfur pr...350.65     36.6     40     63
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
565B3MC74    335   CIAO1_DROAN Probable cytosolic iron-sulfur pr...2115.6     33.5     21     36
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
566B3RQN1    432   WDR12_TRIAD Ribosome biogenesis protein WDR12...3130.91     36.2     25     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
567Q292E8    335   CIAO1_DROPS Probable cytosolic iron-sulfur pr...350.52     37     37     66
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
568P93339    377   GBB_NICPL Guanine nucleotide-binding protein ...1380.04     40.4     27     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
569Q5GIS3    341   GBB_PINFU Guanine nucleotide-binding protein ...1244.8     33.9     28     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
570Q54DS8    301   SEC13_DICDI Protein transport protein SEC13 O...2740.0003     47     23     42GO:0030127; C:COPII vesicle coat; ISS:dictyBase.::GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; ISS:dictyBase.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:dictyBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
571Q91ZN1    461   COR1A_RAT Coronin-1A OS=Rattus norvegicus (Ra...2360.0003     47.8     26     42GO:0030864; C:cortical actin cytoskeleton; IBA:RefGenome.::GO:0030027; C:lamellipodium; IBA:RefGenome.::GO:0001891; C:phagocytic cup; IBA:RefGenome.::GO:0030670; C:phagocytic vesicle membrane; IEA:UniProtKB-SubCell.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030595; P:leukocyte chemotaxis; IBA:RefGenome.::GO:0051126; P:negative regulation of actin nucleation; IBA:RefGenome.::GO:0001845; P:phagolysosome assembly; IBA:RefGenome.::GO:0050918; P:positive chemotaxis; IBA:RefGenome.::GO:0008360; P:regulation of cell shape; IBA:RefGenome.::GO:0030217; P:T cell differentiation; NAS:RGD.::GO:0032796; P:uropod organization; IBA:RefGenome.
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