Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL213C
Length:
715
Number of sequences:
5887
Description:
YKL213C DOA1 SGDID:S000001696, Chr XI from 34107-31960, Genome Release 64-1-1, reverse complement, Verified ORF, "WD repeat protein required for ubiquitin-mediated protein degradation, forms complex with Cdc48p, plays a role in controlling cellular ubiquitin concentration; also promotes efficient NHEJ in postdiauxic/stationary phase"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
391O54927    421   WSB1_MOUSE WD repeat and SOCS box-containing ...810.14     38.9     32     53
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
392Q5DFU0    352   CIAO1_SCHJA Probable cytosolic iron-sulfur pr...2241.8     35.4     24     42
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
393Q6CJ50    705   MDV1_KLULA Mitochondrial division protein 1 O...3080.000002     55.1     22     43GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
394Q6CG48    437   LIS1_YARLI Nuclear distribution protein PAC1 ...1760.0002     48.5     28     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
395Q9FE91    419   C3H62_ARATH Zinc finger CCCH domain-containin...3150.000002     54.3     24     41
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
396Q6ZMY6    472   WDR88_HUMAN WD repeat-containing protein 88 O...1010.048     40.4     26     50
397P93107    606   PF20_CHLRE Flagellar WD repeat-containing pro...1310.00004     50.4     29     49GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0019861; C:flagellum; IEA:UniProtKB-SubCell.
398Q5E9I7    342   MEP50_BOVIN Methylosome protein 50 OS=Bos tau...1050.000002     54.3     32     51GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
399B4HND9    680   WDR48_DROSE WD repeat-containing protein 48 h...1222.2     35.4     26     48
400Q9BRX9    315   WDR83_HUMAN WD repeat domain-containing prote...1320.39     37.4     25     42GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.
401B4QB64    668   WDR48_DROSI WD repeat-containing protein 48 h...1222     35.4     26     48
402Q7ZVA0    513   SMU1_DANRE WD40 repeat-containing protein SMU...2290.000002     54.3     27     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
403Q6FJZ9    427   PRP46_CANGA Pre-mRNA-splicing factor PRP46 OS...2920.0005     46.6     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
404Q7PS24    341   CIAO1_ANOGA Probable cytosolic iron-sulfur pr...1980.061     40     26     43
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
405Q27954    1224   COPA_BOVIN Coatomer subunit alpha OS=Bos taur...2660.000002     54.7     23     40GO:0030126; C:COPI vesicle coat; IDA:UniProtKB.::GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0005179; F:hormone activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006891; P:intra-Golgi vesicle-mediated transport; TAS:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:UniProtKB.
406A7RHG8    416   WDR12_NEMVE Ribosome biogenesis protein WDR12...1550.027     41.2     28     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
407Q5VQ78    907   COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza...1490.0007     47     29     44GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
408Q54Y96    530   SMU1_DICDI WD40 repeat-containing protein smu...1300.004     44.3     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
409Q8BHB4    942   WDR3_MOUSE WD repeat-containing protein 3 OS=...1660.042     40.8     26     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
410Q0U2T3    681   MDV1_PHANO Mitochondrial division protein 1 O...573.9     34.7     32     56GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
411Q6H8D6    910   COB23_ORYSJ Putative coatomer subunit beta'-3...3020.000006     53.5     22     41GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
412Q676U5    607   A16L1_HUMAN Autophagy-related protein 16-1 OS...2400.000003     54.3     26     45GO:0005776; C:autophagic vacuole; ISS:UniProtKB.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000045; P:autophagic vacuole assembly; NAS:UniProtKB.::GO:0051260; P:protein homooligomerization; NAS:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
413Q8CIE6    1224   COPA_MOUSE Coatomer subunit alpha OS=Mus musc...2660.000003     54.7     23     40GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0005179; F:hormone activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
414Q7ZXZ2    515   UTP15_XENLA U3 small nucleolar RNA-associated...1239.1     33.1     25     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
415Q0U1B1    462   LIS1_PHANO Nuclear distribution protein PAC1 ...1050.68     37     30     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
416C4YFX2    511   TUP1_CANAW Transcriptional repressor TUP1 OS=...1790.86     36.6     27     41
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
417P0CY34    512   TUP1_CANAL Transcriptional repressor TUP1 OS=...1790.86     36.6     27     41GO:0005625; C:soluble fraction; IDA:CGD.
GO:0016337; P:cell-cell adhesion; IMP:CGD.::GO:0071280; P:cellular response to copper ion; IMP:CGD.::GO:0035690; P:cellular response to drug; IMP:CGD.::GO:0044409; P:entry into host; IMP:CGD.::GO:0051834; P:evasion or tolerance of defenses of other organism involved in symbiotic interaction; IMP:CGD.::GO:0030448; P:hyphal growth; IMP:CGD.::GO:0045827; P:negative regulation of isoprenoid metabolic process; IMP:CGD.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:CGD.::GO:0009405; P:pathogenesis; IMP:CGD.::GO:0009372; P:quorum sensing; IMP:CGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
418Q28YY2    680   WDR48_DROPS WD repeat-containing protein 48 h...743.1     34.7     28     54
419B4GIJ0    680   WDR48_DROPE WD repeat-containing protein 48 h...743.1     34.7     28     54
420Q9C4Z6    326   GPLPB_ARATH Guanine nucleotide-binding protei...3250.000004     53.1     24     42GO:0022626; C:cytosolic ribosome; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071215; P:cellular response to abscisic acid stimulus; IEP:TAIR.::GO:0006417; P:regulation of translation; IGI:TAIR.::GO:0042254; P:ribosome biogenesis; IGI:TAIR.::GO:0048364; P:root development; IGI:TAIR.::GO:0009845; P:seed germination; IGI:TAIR.::GO:0048367; P:shoot development; IGI:TAIR.
421Q7T2F6    423   WSB1_DANRE WD repeat and SOCS box-containing ...2003.2     34.7     25     39
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
records
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