Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL213C
Length:
715
Number of sequences:
5887
Description:
YKL213C DOA1 SGDID:S000001696, Chr XI from 34107-31960, Genome Release 64-1-1, reverse complement, Verified ORF, "WD repeat protein required for ubiquitin-mediated protein degradation, forms complex with Cdc48p, plays a role in controlling cellular ubiquitin concentration; also promotes efficient NHEJ in postdiauxic/stationary phase"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
331Q9AV81    527   PUB72_ORYSJ U-box domain-containing protein 7...2480.0000004     57     26     44GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
332P97499    2629   TEP1_MOUSE Telomerase protein component 1 OS=...1851.4     36.2     27     45GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005625; C:soluble fraction; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IMP:UniProtKB.
333D4DG66    461   LIS1_TRIVH Nuclear distribution protein PAC1 ...1030.93     36.2     32     50GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
334D4AZ50    461   LIS1_ARTBC Nuclear distribution protein PAC1 ...1030.93     36.2     32     50GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
335Q55DA2    333   CIAO1_DICDI Probable cytosolic iron-sulfur pr...2210.000002     54.3     29     47
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
336A7THX0    706   MDV1_VANPO Mitochondrial division protein 1 O...1470.035     41.2     26     49GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
337P69104    318   GBLP_TRYBR Guanine nucleotide-binding protein...2330.0000005     55.8     25     45
338P69103    318   GBLP_TRYBB Guanine nucleotide-binding protein...2330.0000005     55.8     25     45
339A7EKM8    458   LIS1_SCLS1 Nuclear distribution protein PAC1 ...2720.0001     48.9     23     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
340Q54YD8    1005   COPB2_DICDI Coatomer subunit beta' OS=Dictyos...1390.007     43.5     28     47GO:0030126; C:COPI vesicle coat; ISS:dictyBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
341Q19124    578   A16L1_CAEEL Autophagic-related protein 16.1 O...2280.45     37.4     22     39
342O42937    796   COPB2_SCHPO Probable coatomer subunit beta' O...1520.078     40     29     46GO:0030126; C:COPI vesicle coat; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0032511; P:late endosome to vacuole transport via multivesicular body sorting pathway; ISS:PomBase.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; ISS:PomBase.
343P40968    455   PRP17_YEAST Pre-mRNA-processing factor 17 OS=...1020.022     41.6     27     46GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0000350; P:generation of catalytic spliceosome for second transesterification step; IMP:SGD.::GO:0000389; P:nuclear mRNA 3'-splice site recognition; IGI:SGD.::GO:0000348; P:nuclear mRNA branch site recognition; IGI:SGD.
344Q5XX13    1052   FBW10_HUMAN F-box/WD repeat-containing protei...1160.0007     46.6     29     50
345Q922B6    594   TRAF7_MOUSE E3 ubiquitin-protein ligase TRAF7...2740.0000006     56.2     26     44GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000185; P:activation of MAPKKK activity; ISS:UniProtKB.::GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0042981; P:regulation of apoptotic process; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
346B4GT01    419   WDR12_DROPE Ribosome biogenesis protein WDR12...1710.21     38.5     21     47GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
347C6HTE8    456   LIS1_AJECH Nuclear distribution protein PAC1 ...2970.00003     50.8     24     36GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
348C0NRC6    456   LIS1_AJECG Nuclear distribution protein PAC1 ...2970.00003     50.8     24     36GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
349B6QC56    459   LIS11_PENMQ Nuclear distribution protein nudF...2810.00008     49.3     25     38GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
350B2AEZ5    464   LIS11_PODAN Nuclear distribution protein PAC1...1050.43     37.4     30     50GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
351Q99973    2627   TEP1_HUMAN Telomerase protein component 1 OS=...1422.9     35     28     44GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IDA:MGI.::GO:0016363; C:nuclear matrix; IDA:MGI.::GO:0005625; C:soluble fraction; ISS:UniProtKB.::GO:0005697; C:telomerase holoenzyme complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0000722; P:telomere maintenance via recombination; IDA:UniProtKB.
352Q3KQ62    314   WDR83_XENLA WD repeat domain-containing prote...2531.8     35     22     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
353Q54LT8    293   STRAP_DICDI Serine-threonine kinase receptor-...1060.006     42.7     30     51
GO:0004872; F:receptor activity; ISS:dictyBase.
GO:0030512; P:negative regulation of transforming growth factor beta receptor signaling pathway; ISS:dictyBase.
354Q9JMJ4    504   PRP19_RAT Pre-mRNA-processing factor 19 OS=Ra...1050.002     45.1     29     47GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
355Q99KP6    504   PRP19_MOUSE Pre-mRNA-processing factor 19 OS=...1050.002     45.1     29     47GO:0005811; C:lipid particle; IDA:MGI.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0001833; P:inner cell mass cell proliferation; IMP:MGI.::GO:0008610; P:lipid biosynthetic process; IDA:MGI.::GO:0045665; P:negative regulation of neuron differentiation; IDA:MGI.::GO:0048711; P:positive regulation of astrocyte differentiation; IDA:MGI.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; IMP:MGI.
356Q9NVX2    485   NLE1_HUMAN Notchless protein homolog 1 OS=Hom...1810.02     41.6     25     42GO:0005730; C:nucleolus; IDA:HPA.
357Q08E38    504   PRP19_BOVIN Pre-mRNA-processing factor 19 OS=...1050.003     44.7     28     47GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
358Q4WLM7    467   LIS1_ASPFU Nuclear distribution protein nudF ...1050.97     36.2     30     50GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
359B0XM00    467   LIS1_ASPFC Nuclear distribution protein nudF ...1050.97     36.2     30     50GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
360O74319    642   TAF73_SCHPO Transcription initiation factor T...1420.00003     50.8     29     45GO:0005829; C:cytosol; IDA:PomBase.::GO:0005669; C:transcription factor TFIID complex; TAS:PomBase.
GO:0000991; F:core RNA polymerase II binding transcription factor activity; IC:PomBase.
GO:0030071; P:regulation of mitotic metaphase/anaphase transition; IGI:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:PomBase.
361A1CUD6    467   LIS11_ASPCL Nuclear distribution protein nudF...1051.1     36.2     30     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
records
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