Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL160W
Length:
145
Number of sequences:
5887
Description:
YKL160W ELF1 SGDID:S000001643, Chr XI from 153269-153706, Genome Release 64-1-1, Verified ORF, "Transcription elongation factor that contains a conserved zinc finger domain; implicated in the maintenance of proper chromatin structure in actively transcribed regions; deletion inhibits Brome mosaic virus (BMV) gene expression"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P36053    145   ELF1_YEAST Transcription elongation factor 1 ...1452e-100     291     100     100GO:0008023; C:transcription elongation factor complex; IDA:SGD.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000993; F:RNA polymerase II core binding; IDA:SGD.
GO:0034401; P:regulation of transcription by chromatin organization; IMP:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IMP:SGD.
2O13868    107   ELOF1_SCHPO Transcription elongation factor 1...1079e-31     112     51     64GO:0005634; C:nucleus; IDA:PomBase.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006325; P:chromatin organization; ISS:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:PomBase.
3Q9XVZ8    84   ELOF1_CAEEL Transcription elongation factor 1...845e-27     102     51     71GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
4Q8LHP0    89   ELOF1_ORYSJ Transcription elongation factor 1...826e-27     102     51     72GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
5Q8MQI6    82   ELOF1_DROME Transcription elongation factor 1...821e-22     90.9     49     67GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6Q54KR5    80   ELOF1_DICDI Transcription elongation factor 1...802e-22     90.1     50     69GO:0005634; C:nucleus; ISS:dictyBase.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000993; F:RNA polymerase II core binding; ISS:dictyBase.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:dictyBase.
7Q8LEF3    120   ELOF1_ARATH Transcription elongation factor 1...842e-22     91.3     50     69GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
8Q9U501    82   ELOF1_MANSE Transcription elongation factor 1...823e-21     87     45     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9P60003    83   ELOF1_MOUSE Transcription elongation factor 1...632e-18     79.7     54     68GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
10P60002    83   ELOF1_HUMAN Transcription elongation factor 1...632e-18     79.7     54     68GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11A4IFR3    83   ELOF1_BOVIN Transcription elongation factor 1...632e-18     79.7     54     68GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
12Q8STS7    80   ELOF1_ENCCU Transcription elongation factor 1...750.00000000003     60.1     39     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
13Q94AQ6    373   SIR4_ARATH NAD-dependent protein deacetylase ...910.58     33.5     26     44GO:0005634; C:nucleus; IDA:TAIR.
GO:0070403; F:NAD+ binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0042742; P:defense response to bacterium; IMP:TAIR.::GO:0031348; P:negative regulation of defense response; IMP:TAIR.::GO:0006476; P:protein deacetylation; IEA:InterPro.
14P52168    540   PNR_DROME GATA-binding factor A OS=Drosophila...630.93     32.7     29     56GO:0005634; C:nucleus; IDA:FlyBase.
GO:0046982; F:protein heterodimerization activity; IPI:FlyBase.::GO:0000983; F:RNA polymerase II core promoter sequence-specific DNA binding transcription factor activity; IDA:FlyBase.::GO:0001103; F:RNA polymerase II repressing transcription factor binding; IPI:FlyBase.::GO:0043565; F:sequence-specific DNA binding; IDA:FlyBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007350; P:blastoderm segmentation; IMP:FlyBase.::GO:0007510; P:cardioblast cell fate determination; IMP:FlyBase.::GO:0008407; P:chaeta morphogenesis; TAS:FlyBase.::GO:0007391; P:dorsal closure; TAS:FlyBase.::GO:0007398; P:ectoderm development; TAS:FlyBase.::GO:0035050; P:embryonic heart tube development; IMP:FlyBase.::GO:0060047; P:heart contraction; IMP:FlyBase.::GO:0048542; P:lymph gland development; IMP:FlyBase.::GO:0045892; P:negative regulation of transcription, DNA-dependent; TAS:FlyBase.::GO:0061320; P:pericardial nephrocyte differentiation; IMP:FlyBase.::GO:0042440; P:pigment metabolic process; IMP:FlyBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.::GO:0002805; P:regulation of antimicrobial peptide biosynthetic process; IMP:FlyBase.::GO:0007179; P:transforming growth factor beta receptor signaling pathway; TAS:FlyBase.
15Q4AAI5    465   TIG_MYCHJ Trigger factor OS=Mycoplasma hyopne...301.8     32     50     70GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:InterPro.
16Q601G9    465   TIG_MYCH2 Trigger factor OS=Mycoplasma hyopne...301.9     32     50     70GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:InterPro.
17A0JMD0    1400   K0664_DANRE Protein KIAA0664 homolog OS=Danio...424.1     31.2     40     57
GO:0005488; F:binding; IEA:InterPro.
18Q7VRU9    372   PDXB_BLOFL Erythronate-4-phosphate dehydrogen...514.1     30.8     37     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0033711; F:4-phosphoerythronate dehydrogenase activity; IEA:EC.::GO:0051287; F:NAD binding; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.
GO:0008615; P:pyridoxine biosynthetic process; IEA:UniProtKB-KW.
19B1HMW4    119   RL18_LYSSC 50S ribosomal protein L18 OS=Lysin...585.4     29.6     28     50GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
20Q54TM7    1288   DRKD_DICDI Probable serine/threonine-protein ...546.2     30.4     26     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
21Q811F1    908   ZBT41_MOUSE Zinc finger and BTB domain-contai...596.4     30.4     32     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
22Q5SVQ8    909   ZBT41_HUMAN Zinc finger and BTB domain-contai...596.5     30.4     32     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
23Q74ZA4    411   ETT1_ASHGO Enhancer of translation terminatio...448     30     36     64GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
24Q4I327    538   BFR2_GIBZE Protein BFR2 OS=(Wheat head blight...398.4     30     49     56GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
25Q6P0D5    640   WBP11_DANRE WW domain-binding protein 11 OS=D...359.7     30     34     69GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
26Q99PP6    485   TR34A_MOUSE Tripartite motif-containing prote...519.8     29.6     35     49GO:0005622; C:intracellular; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
records
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