Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL144C
Length:
212
Number of sequences:
5887
Description:
YKL144C RPC25 SGDID:S000001627, Chr XI from 176481-175843, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase III subunit C25, required for transcription initiation; forms a heterodimer with Rpc17p; paralog of Rpb7p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P35718    212   RPC8_YEAST DNA-directed RNA polymerase III su...2127e-156     437     100     100GO:0005666; C:DNA-directed RNA polymerase III complex; IDA:SGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006384; P:transcription initiation from RNA polymerase III promoter; IMP:SGD.::GO:0042797; P:tRNA transcription from RNA polymerase III promoter; IDA:SGD.
2O94285    203   RPC8_SCHPO DNA-directed RNA polymerase III su...2179e-61     195     44     65GO:0005829; C:cytosol; IDA:PomBase.::GO:0005666; C:DNA-directed RNA polymerase III complex; IDA:PomBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IMP:PomBase.
GO:0006384; P:transcription initiation from RNA polymerase III promoter; IMP:PomBase.
3Q9Y535    204   RPC8_HUMAN DNA-directed RNA polymerase III su...2143e-52     173     43     57GO:0005666; C:DNA-directed RNA polymerase III complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IDA:UniProtKB.
GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006386; P:termination of RNA polymerase III transcription; TAS:Reactome.::GO:0006385; P:transcription elongation from RNA polymerase III promoter; TAS:Reactome.
4Q2T9X1    204   RPC8_BOVIN DNA-directed RNA polymerase III su...2142e-49     166     43     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.
5Q9D2C6    204   RPC8_MOUSE DNA-directed RNA polymerase III su...2142e-49     166     43     57GO:0005666; C:DNA-directed RNA polymerase III complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:UniProtKB.
GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006383; P:transcription from RNA polymerase III promoter; ISS:UniProtKB.
6Q557J3    252   RPC8_DICDI DNA-directed RNA polymerase III su...2254e-30     117     34     53GO:0005666; C:DNA-directed RNA polymerase III complex; ISS:dictyBase.
GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.
GO:0006384; P:transcription initiation from RNA polymerase III promoter; ISS:dictyBase.
7Q57840    187   RPOE1_METJA DNA-directed RNA polymerase subun...1500.00000000000002     72     28     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.
8P34087    171   RPB7_YEAST DNA-directed RNA polymerase II sub...1080.00000000003     62.8     30     56GO:0000932; C:cytoplasmic mRNA processing body; IDA:SGD.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:SGD.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IDA:SGD.::GO:0003727; F:single-stranded RNA binding; IDA:SGD.::GO:0031369; F:translation initiation factor binding; IPI:SGD.
GO:0000291; P:nuclear-transcribed mRNA catabolic process, exonucleolytic; IGI:SGD.::GO:0060213; P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening; IMP:SGD.::GO:0045948; P:positive regulation of translational initiation; IMP:SGD.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IDA:SGD.
9P39466    183   RPOE_SULAC DNA-directed RNA polymerase subuni...1010.0000000005     59.3     30     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.
10Q54P04    172   RPB7_DICDI DNA-directed RNA polymerase II sub...1420.000004     48.5     25     45GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; ISS:dictyBase.
GO:0003899; F:DNA-directed RNA polymerase activity; IGI:dictyBase.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003697; F:single-stranded DNA binding; ISS:dictyBase.
GO:0006366; P:transcription from RNA polymerase II promoter; IGI:dictyBase.
11Q7ZW41    172   RPB7_DANRE DNA-directed RNA polymerase II sub...1530.0003     43.1     24     43GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
12P62489    172   RPB7_RAT DNA-directed RNA polymerase II subun...1530.0006     42.7     24     43GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IEP:RGD.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
13P62488    172   RPB7_MOUSE DNA-directed RNA polymerase II sub...1530.0006     42.7     24     43GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
14P62487    172   RPB7_HUMAN DNA-directed RNA polymerase II sub...1530.0006     42.7     24     43GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
15Q5E9B8    172   RPB7_BOVIN DNA-directed RNA polymerase II sub...1530.0006     42.7     24     43GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
16O14459    172   RPB7_SCHPO DNA-directed RNA polymerase II sub...870.003     40.8     25     51GO:0005829; C:cytosol; IDA:PomBase.::GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IC:PomBase.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0031123; P:RNA 3'-end processing; IPI:PomBase.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:PomBase.
17O43036    173   RPA43_SCHPO DNA-directed RNA polymerase I sub...1150.19     35.4     27     47GO:0005829; C:cytosol; IDA:PomBase.::GO:0005736; C:DNA-directed RNA polymerase I complex; TAS:PomBase.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006360; P:transcription from RNA polymerase I promoter; IC:PomBase.
18Q55FA4    356   RPA43_DICDI Probable DNA-directed RNA polymer...1140.25     35.4     25     50GO:0005736; C:DNA-directed RNA polymerase I complex; ISS:dictyBase.
GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006360; P:transcription from RNA polymerase I promoter; ISS:dictyBase.
19P46279    176   RPB7_SOYBN DNA-directed RNA polymerase II sub...1340.25     35     22     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.
20P49374    551   HGT1_KLULA High-affinity glucose transporter ...910.63     34.7     29     47GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0022891; F:substrate-specific transmembrane transporter activity; IEA:InterPro.
GO:0008643; P:carbohydrate transport; IEA:UniProtKB-KW.
21P38421    176   RPB7_ARATH DNA-directed RNA polymerase II sub...860.68     33.9     23     44GO:0005665; C:DNA-directed RNA polymerase II, core complex; IPI:TAIR.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.
22P36229    307   REP_BACSP Protein rep OS=Bacillus sp. GN=repA...740.85     33.9     30     50GO:0005727; C:extrachromosomal circular DNA; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
23P13963    339   REP_BACAM Protein rep OS=Bacillus amyloliquef...731.2     33.5     29     51GO:0005727; C:extrachromosomal circular DNA; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
records
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