rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | P35728 | 441 | MPE1_YEAST Protein MPE1 OS=Saccharomyces cere... | 441 | 0 | 917 | 100 | 100 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:SGD. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006379; P:mRNA cleavage; IGI:SGD.::GO:0006378; P:mRNA polyadenylation; IGI:SGD. | 2 | O94264 | 482 | YORF_SCHPO Uncharacterized RING finger protei... | 447 | 2e-99 | 312 | 40 | 57 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:PomBase. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006379; P:mRNA cleavage; ISS:PomBase.::GO:0006378; P:mRNA polyadenylation; ISS:PomBase.::GO:0016567; P:protein ubiquitination; NAS:PomBase. | 3 | P97868 | 1790 | RBBP6_MOUSE E3 ubiquitin-protein ligase RBBP6... | 358 | 3e-40 | 159 | 31 | 50 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; ISS:UniProtKB. | 4 | Q7Z6E9 | 1792 | RBBP6_HUMAN E3 ubiquitin-protein ligase RBBP6... | 355 | 1e-39 | 157 | 30 | 50 | GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:UniProtKB. | 5 | B2RVL6 | 241 | ZCH24_MOUSE Zinc finger CCHC domain-containin... | 101 | 0.3 | 36.6 | 27 | 46 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 6 | Q9CQE0 | 245 | RN138_MOUSE E3 ubiquitin-protein ligase RNF13... | 45 | 0.44 | 36.2 | 36 | 58 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW. | 7 | Q5ZRQ0 | 246 | LUBX_LEGPH E3 ubiquitin-protein ligase LubX O... | 61 | 0.45 | 36.2 | 30 | 54 | GO:0043657; C:host cell; IDA:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro. | | | | | | | | | | GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB. | | | | | | | | | | GO:0009405; P:pathogenesis; IDA:UniProtKB. | 8 | Q99PD2 | 209 | RN138_RAT E3 ubiquitin-protein ligase RNF138 ... | 45 | 0.46 | 35.8 | 36 | 58 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW. | 9 | Q32LN5 | 245 | RN138_BOVIN E3 ubiquitin-protein ligase RNF13... | 45 | 0.46 | 35.8 | 36 | 58 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW. | 10 | Q5X159 | 240 | LUBX_LEGPA E3 ubiquitin-protein ligase LubX O... | 61 | 0.48 | 35.8 | 30 | 54 | GO:0043657; C:host cell; ISS:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro. | | | | | | | | | | GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB. | | | | | | | | | | GO:0009405; P:pathogenesis; ISS:UniProtKB. | 11 | Q8HXK7 | 241 | ZCH24_MACFA Zinc finger CCHC domain-containin... | 46 | 0.6 | 35.4 | 37 | 57 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 12 | Q8N2G6 | 241 | ZCH24_HUMAN Zinc finger CCHC domain-containin... | 46 | 0.63 | 35.4 | 37 | 57 | | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 13 | Q1A268 | 499 | GAG_SIVMB Gag polyprotein OS=immunodeficiency... | 39 | 0.93 | 35.4 | 36 | 51 | GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 14 | Q8WVD3 | 245 | RN138_HUMAN E3 ubiquitin-protein ligase RNF13... | 45 | 1 | 35 | 36 | 58 | GO:0005622; C:intracellular; IEA:InterPro. | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0019901; F:protein kinase binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW. | 15 | Q30YS6 | 351 | RECA_DESDG Protein RecA OS=Desulfovibrio desu... | 85 | 1.8 | 34.3 | 29 | 51 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IEA:InterPro.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW. | 16 | P35962 | 500 | GAG_HV1Y2 Gag polyprotein OS=(HIV-1). GN=gag ... | 56 | 1.8 | 34.7 | 38 | 48 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0010008; C:endosome membrane; TAS:Reactome.::GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0046788; P:egress of virus within host cell; TAS:Reactome.::GO:0030260; P:entry into host cell; TAS:Reactome.::GO:0019047; P:provirus integration; TAS:Reactome.::GO:0006278; P:RNA-dependent DNA replication; TAS:Reactome.::GO:0019061; P:uncoating of virus; TAS:Reactome. | 17 | Q92021 | 609 | NF7B_XENLA Nuclear factor 7, brain OS=Xenopus... | 53 | 1.9 | 34.7 | 32 | 49 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 18 | P03349 | 502 | GAG_HV1A2 Gag polyprotein OS=ARV2/SF2) (HIV-1... | 56 | 2.1 | 34.3 | 39 | 48 | GO:0005829; C:cytosol; TAS:Reactome.::GO:0010008; C:endosome membrane; TAS:Reactome.::GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0046788; P:egress of virus within host cell; TAS:Reactome.::GO:0030260; P:entry into host cell; TAS:Reactome.::GO:0019047; P:provirus integration; TAS:Reactome.::GO:0006278; P:RNA-dependent DNA replication; TAS:Reactome.::GO:0019061; P:uncoating of virus; TAS:Reactome. | 19 | Q6MGB6 | 406 | RING1_RAT E3 ubiquitin-protein ligase RING1 O... | 109 | 2.2 | 34.3 | 23 | 43 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0035102; C:PRC1 complex; ISS:UniProtKB. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 20 | Q75001 | 504 | GAG_HV1ET Gag polyprotein OS=ETH2220) (HIV-1)... | 57 | 2.2 | 34.3 | 35 | 49 | GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 21 | Q91431 | 610 | NF7O_XENLA Nuclear factor 7, ovary OS=Xenopus... | 63 | 2.4 | 34.3 | 29 | 46 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 22 | O35730 | 406 | RING1_MOUSE E3 ubiquitin-protein ligase RING1... | 109 | 2.4 | 34.3 | 23 | 43 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0001739; C:sex chromatin; IDA:MGI.::GO:0000151; C:ubiquitin ligase complex; IDA:MGI. | | | | | | | | | | GO:0003682; F:chromatin binding; IDA:MGI.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0009952; P:anterior/posterior pattern specification; IMP:MGI.::GO:0048593; P:camera-type eye morphogenesis; IGI:MGI.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 23 | Q6IQ97 | 419 | RBM41_DANRE RNA-binding protein 4.1 OS=Danio ... | 22 | 3 | 33.9 | 45 | 64 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 24 | Q06587 | 406 | RING1_HUMAN E3 ubiquitin-protein ligase RING1... | 109 | 3 | 33.9 | 23 | 43 | GO:0005737; C:cytoplasm; IDA:HPA.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0035102; C:PRC1 complex; IDA:UniProtKB. | | | | | | | | | | GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; NAS:UniProtKB. | | | | | | | | | | GO:0035518; P:histone H2A monoubiquitination; IDA:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 25 | Q4U0X6 | 1440 | POL_HTL3P Gag-Pro-Pol polyprotein OS=Human T-... | 45 | 3.1 | 34.3 | 33 | 47 | GO:0019013; C:viral nucleocapsid; IEA:InterPro. | | | | | | | | | | GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:EC.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.::GO:0016032; P:viral reproduction; IEA:InterPro. | 26 | Q5TJF3 | 406 | RING1_CANFA E3 ubiquitin-protein ligase RING1... | 109 | 3.1 | 33.9 | 23 | 43 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0035102; C:PRC1 complex; ISS:UniProtKB. | | | | | | | | | | GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 27 | Q9WC53 | 497 | GAG_HV1S2 Gag polyprotein OS=(HIV-1). GN=gag ... | 40 | 3.3 | 33.9 | 40 | 55 | GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 28 | Q9SNC6 | 660 | PUB13_ARATH U-box domain-containing protein 1... | 73 | 3.5 | 33.9 | 33 | 47 | GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro. | | | | | | | | | | GO:0070696; F:transmembrane receptor protein serine/threonine kinase binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:TAIR. | | | | | | | | | | GO:0042742; P:defense response to bacterium; IGI:TAIR. | 29 | Q9WC62 | 497 | GAG_HV1S9 Gag polyprotein OS=(HIV-1). GN=gag ... | 40 | 3.5 | 33.5 | 40 | 55 | GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 30 | O93182 | 500 | GAG_HV190 Gag polyprotein OS=90CF056) (HIV-1)... | 40 | 3.6 | 33.5 | 40 | 55 | GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0020002; C:host cell plasma membrane; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-KW.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016032; P:viral reproduction; IEA:InterPro. | 31 | Q4V8A0 | 247 | NSE2_RAT E3 SUMO-protein ligase NSE2 OS=Rattu... | 76 | 3.9 | 33.1 | 29 | 53 | GO:0000781; C:chromosome, telomeric region; ISS:UniProtKB.::GO:0016605; C:PML body; ISS:UniProtKB.::GO:0030915; C:Smc5-Smc6 complex; ISS:UniProtKB. | | | | | | | | | | GO:0019789; F:SUMO ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0090398; P:cellular senescence; ISS:UniProtKB.::GO:0000724; P:double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0034184; P:positive regulation of maintenance of mitotic sister chromatid cohesion; ISS:UniProtKB.::GO:0045842; P:positive regulation of mitotic metaphase/anaphase transition; ISS:UniProtKB.::GO:0000722; P:telomere maintenance via recombination; ISS:UniProtKB. |