Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL028W
Length:
482
Number of sequences:
5887
Description:
YKL028W TFA1 SGDID:S000001511, Chr XI from 385758-387206, Genome Release 64-1-1, Verified ORF, "TFIIE large subunit, involved in recruitment of RNA polymerase II to the promoter, activation of TFIIH, and promoter opening"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P36100    482   T2EA_YEAST Transcription initiation factor II...4820     988     100     100GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005673; C:transcription factor TFIIE complex; IDA:SGD.
GO:0000993; F:RNA polymerase II core binding; IPI:SGD.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0001113; P:transcriptional open complex formation at RNA polymerase II promoter; IDA:SGD.
2Q9P3W1    434   T2EA_SCHPO Transcription initiation factor II...3772e-39     152     27     47GO:0005673; C:transcription factor TFIIE complex; IDA:PomBase.
GO:0000991; F:core RNA polymerase II binding transcription factor activity; TAS:PomBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:PomBase.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0051290; P:protein heterotetramerization; IDA:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:PomBase.
3P29083    439   T2EA_HUMAN General transcription factor IIE s...2121e-26     114     30     53GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
4Q9D0D5    440   T2EA_MOUSE General transcription factor IIE s...1832e-26     114     30     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IEA:InterPro.
5Q5R8H5    439   T2EA_PONAB General transcription factor IIE s...2126e-26     112     29     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IEA:InterPro.
6A6QLI8    438   T2EA_BOVIN General transcription factor IIE s...1832e-25     111     29     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IEA:InterPro.
7Q557M8    456   T2EA_DICDI General transcription factor IIE s...2930.000000000000004     80.9     25     44GO:0005615; C:extracellular space; IDA:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
8Q9YAD5    189   TFE_AERPE Transcription factor E OS=100138 / ...1740.017     40     25     47
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IEA:InterPro.
9A2BLW2    173   TFE_HYPBU Transcription factor E OS=Hyperther...970.12     37.4     28     52
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
10A8ABJ9    173   TFE_IGNH4 Transcription factor E OS=Ignicoccu...1750.16     37     24     47
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11Q18DN4    9159   HMU_HALWD Halomucin OS=Haloquadratum walsbyi ...991.1     35.8     19     45GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:InterPro.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0030246; F:carbohydrate binding; IEA:InterPro.::GO:0004180; F:carboxypeptidase activity; IEA:InterPro.
GO:0007156; P:homophilic cell adhesion; IEA:InterPro.
12Q06FP6    2552   YCF1_PELHO Putative membrane protein ycf1 OS=...790.49     37     33     57GO:0031969; C:chloroplast membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
13A4WGY5    170   TFE_PYRAR Transcription factor E OS=Pyrobacul...1513.1     33.1     25     45
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
14A6UW55    173   TFE_META3 Transcription factor E OS=Methanoco...1314.6     32.7     24     47
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
15Q6FI81    312   CPIN1_HUMAN Anamorsin OS=Homo sapiens (Human)...1145     33.1     25     49GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.
GO:0006916; P:anti-apoptosis; ISS:UniProtKB.::GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.
16Q58187    173   TFE_METJA Transcription factor E OS=JCM 10045...1535.6     32.3     20     46
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IEA:InterPro.
17A4YJ15    176   TFE_METS5 Transcription factor E OS=Metallosp...1615.9     32.3     25     43
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
18A1RY32    178   TFE_THEPD Transcription factor E OS=Thermofil...1525.9     32.3     25     43
GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
19A6ZJ55    420   YRT7_CAEEL Uncharacterized protein T07A5.7 OS...976.9     32.7     31     53
20Q6DT37    1551   MRCKG_HUMAN Serine/threonine-protein kinase M...1827.7     33.1     20     38GO:0031252; C:cell leading edge; IDA:UniProtKB.::GO:0005813; C:centrosome; IDA:HPA.
GO:0005524; F:ATP binding; IDA:UniProtKB.::GO:0000287; F:magnesium ion binding; IDA:UniProtKB.::GO:0005543; F:phospholipid binding; IEA:InterPro.::GO:0004674; F:protein serine/threonine kinase activity; IDA:UniProtKB.::GO:0005083; F:small GTPase regulator activity; IEA:InterPro.
GO:0031532; P:actin cytoskeleton reorganization; ISS:UniProtKB.::GO:0035556; P:intracellular signal transduction; IEA:InterPro.
records
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