Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL018W
Length:
329
Number of sequences:
5887
Description:
YKL018W SWD2 SGDID:S000001501, Chr XI from 404102-405091, Genome Release 64-1-1, Verified ORF, "Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lys 4 and is involved in telomeric silencing; subunit of CPF (cleavage and polyadenylation factor), a complex involved in RNAP II transcription termination"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
631P46680    615   AIP1_YEAST Actin-interacting protein 1 OS=Sac...2161.3     34.7     22     41GO:0030479; C:actin cortical patch; TAS:SGD.::GO:0043332; C:mating projection tip; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0003779; F:actin binding; IPI:UniProtKB.
GO:0030042; P:actin filament depolymerization; IPI:SGD.::GO:0006970; P:response to osmotic stress; TAS:SGD.
632Q8FQ44    309   KHSE_COREF Homoserine kinase OS=11189 / NBRC ...631.3     34.3     27     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004413; F:homoserine kinase activity; IEA:EC.
GO:0009088; P:threonine biosynthetic process; IEA:UniProtKB-KW.
633Q2GTM8    341   EIF3I_CHAGB Eukaryotic translation initiation...441.4     34.3     30     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
634Q8TBZ3    569   WDR20_HUMAN WD repeat-containing protein 20 O...1461.4     34.3     24     43
635A4IIX9    494   WDR37_XENTR WD repeat-containing protein 37 O...491.4     34.3     29     53
636Q7ZVR1    832   WDR75_DANRE WD repeat-containing protein 75 O...2361.4     34.7     20     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
637P41811    889   COPB2_YEAST Coatomer subunit beta' OS=Sacchar...1671.4     34.7     24     43GO:0030126; C:COPI vesicle coat; IGI:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0032511; P:late endosome to vacuole transport via multivesicular body sorting pathway; IMP:SGD.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
638Q5A7Q3    389   PRP46_CANAL Pre-mRNA-splicing factor PRP46 OS...1252     33.9     18     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
639Q6DDF0    495   WDR37_XENLA WD repeat-containing protein 37 O...491.5     34.3     29     53
640Q6DUZ9    387   TSSC1_GECJA Protein TSSC1 OS=Gecko japonicus ...1171.5     34.3     27     44
641Q5APF0    466   YTM1_CANAL Ribosome biogenesis protein YTM1 O...1221.5     34.3     25     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0030447; P:filamentous growth; IMP:CGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
642A7EF03    335   EIF3I_SCLS1 Eukaryotic translation initiation...591.5     33.9     29     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
643Q21215    325   GBLP_CAEEL Guanine nucleotide-binding protein...371.9     33.9     38     65GO:0030424; C:axon; IDA:WormBase.::GO:0044297; C:cell body; IDA:WormBase.::GO:0005813; C:centrosome; IDA:WormBase.::GO:0030426; C:growth cone; IDA:WormBase.::GO:0000776; C:kinetochore; IDA:WormBase.::GO:0005635; C:nuclear envelope; IDA:WormBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0048675; P:axon extension; IMP:WormBase.::GO:0051304; P:chromosome separation; IMP:WormBase.::GO:0000281; P:cytokinesis after mitosis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0008045; P:motor axon guidance; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006997; P:nucleus organization; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0040038; P:polar body extrusion after meiotic divisions; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040017; P:positive regulation of locomotion; IMP:WormBase.::GO:0033365; P:protein localization to organelle; IMP:WormBase.::GO:0030334; P:regulation of cell migration; IMP:WormBase.
644O24076    325   GBLP_MEDSA Guanine nucleotide-binding protein...612.8     33.1     31     49
645Q2UG43    294   SEC13_ASPOR Protein transport protein sec13 O...1021.6     33.9     28     51GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
646P16649    713   TUP1_YEAST General transcriptional corepresso...521.6     34.3     29     50GO:0017053; C:transcriptional repressor complex; IDA:SGD.
GO:0042393; F:histone binding; IDA:SGD.::GO:0042826; F:histone deacetylase binding; IDA:SGD.::GO:0036033; F:mediator complex binding; IDA:SGD.::GO:0080025; F:phosphatidylinositol-3,5-bisphosphate binding; IDA:SGD.::GO:0001191; F:RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription; IDA:SGD.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0043486; P:histone exchange; IMP:SGD.::GO:0035955; P:negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0001198; P:negative regulation of mating-type specific transcription from RNA polymerase II promoter; IMP:SGD.::GO:0000433; P:negative regulation of transcription from RNA polymerase II promoter by glucose; IMP:SGD.::GO:0007070; P:negative regulation of transcription from RNA polymerase II promoter during mitosis; IMP:SGD.::GO:0016584; P:nucleosome positioning; IDA:SGD.::GO:2000531; P:regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:2001020; P:regulation of response to DNA damage stimulus; IMP:SGD.::GO:0061418; P:regulation of transcription from RNA polymerase II promoter in response to hypoxia; IMP:SGD.::GO:0061392; P:regulation of transcription from RNA polymerase II promoter in response to osmotic stress; IMP:SGD.
647Q9Y2I8    494   WDR37_HUMAN WD repeat-containing protein 37 O...491.7     34.3     29     55
648Q5R650    495   WDR37_PONAB WD repeat-containing protein 37 O...491.7     34.3     29     55
649Q5XJS5    323   THOC6_DANRE THO complex subunit 6 homolog OS=...541.7     33.9     26     48
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
650Q96WV5    1207   COPA_SCHPO Putative coatomer subunit alpha OS...481.8     34.3     29     54GO:0030126; C:COPI vesicle coat; ISS:PomBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; ISS:PomBase.
651Q5R7H5    546   DCA11_PONAB DDB1- and CUL4-associated factor ...591.8     34.3     29     53GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
652Q7K0L4    630   WDR26_DROME WD repeat-containing protein 26 h...1191.8     34.3     22     45GO:0005737; C:cytoplasm; ISS:UniProtKB.
653Q8L828    909   COB23_ARATH Coatomer subunit beta'-3 OS=Arabi...1561.9     34.3     25     44GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
654Q17LZ2    866   BOP1_AEDAE Ribosome biogenesis protein BOP1 h...1071.9     34.3     21     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
655Q8TEB1    546   DCA11_HUMAN DDB1- and CUL4-associated factor ...591.9     33.9     29     53GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.
656Q498F0    912   WDR44_XENLA WD repeat-containing protein 44 O...2331.9     34.3     24     42GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
657Q14137    746   BOP1_HUMAN Ribosome biogenesis protein BOP1 O...602     33.9     32     53GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0008283; P:cell proliferation; NAS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:UniProtKB.::GO:0051726; P:regulation of cell cycle; IMP:UniProtKB.
658Q9C2I5    487   YTM1_NEUCR Ribosome biogenesis protein ytm-1 ...402     33.9     38     58GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
659Q91VU6    549   DCA11_MOUSE DDB1- and CUL4-associated factor ...592     33.9     29     53GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
660O35828    443   CORO7_RAT Coronin-7 OS=Rattus norvegicus (Rat...422     33.9     36     60GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; ISS:UniProtKB.::GO:0005625; C:soluble fraction; ISS:UniProtKB.
661B4MYI5    778   BOP1_DROWI Ribosome biogenesis protein BOP1 h...797.6     32.3     23     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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