Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL018W
Length:
329
Number of sequences:
5887
Description:
YKL018W SWD2 SGDID:S000001501, Chr XI from 404102-405091, Genome Release 64-1-1, Verified ORF, "Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lys 4 and is involved in telomeric silencing; subunit of CPF (cleavage and polyadenylation factor), a complex involved in RNAP II transcription termination"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
451O75717    1129   WDHD1_HUMAN WD repeat and HMG-box DNA-binding...2530.089     38.5     23     42GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0005654; C:nucleoplasm; TAS:ProtInc.
GO:0003677; F:DNA binding; TAS:ProtInc.
452A5DL92    453   YTM1_PICGU Ribosome biogenesis protein YTM1 O...1590.093     38.1     24     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
453Q7KWK5    514   PRP19_DICDI Pre-mRNA-processing factor 19 hom...1200.095     38.1     27     45GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; ISS:dictyBase.::GO:0000151; C:ubiquitin ligase complex; ISS:dictyBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:dictyBase.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:dictyBase.
454Q93134    316   GBLP_BIOGL Guanine nucleotide-binding protein...402.3     33.5     35     58
455Q9Y1C1    664   EMAP_LYTVA 77 kDa echinoderm microtubule-asso...1040.1     38.1     27     44GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
456P53621    1224   COPA_HUMAN Coatomer subunit alpha OS=Homo sap...1460.1     38.1     22     43GO:0030126; C:COPI vesicle coat; ISS:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005615; C:extracellular space; IDA:MGI.::GO:0005792; C:microsome; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
GO:0005179; F:hormone activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0048205; P:COPI coating of Golgi vesicle; TAS:Reactome.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0030157; P:pancreatic juice secretion; IDA:MGI.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:Reactome.
457Q9XF57    317   PEX7_ARATH Peroxisome biogenesis protein 7 OS...1780.11     37.7     24     39GO:0005778; C:peroxisomal membrane; IEA:UniProtKB-SubCell.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; IEA:InterPro.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.
GO:0016558; P:protein import into peroxisome matrix; IEA:InterPro.
458P83774    317   GBLP_CANAL Guanine nucleotide-binding protein...460.11     37.7     39     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005625; C:soluble fraction; IDA:CGD.
GO:0007155; P:cell adhesion; IMP:CGD.::GO:0030448; P:hyphal growth; IMP:CGD.::GO:0001403; P:invasive growth in response to glucose limitation; IMP:CGD.::GO:0009405; P:pathogenesis; IMP:CGD.
459P79083    328   EIF3I_SCHPO Eukaryotic translation initiation...1440.11     37.7     22     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0016282; C:eukaryotic 43S preinitiation complex; IDA:PomBase.::GO:0071540; C:eukaryotic translation initiation factor 3 complex, eIF3e; IDA:PomBase.::GO:0071541; C:eukaryotic translation initiation factor 3 complex, eIF3m; IDA:PomBase.::GO:0034399; C:nuclear periphery; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0065007; P:biological regulation; NAS:PomBase.::GO:0071470; P:cellular response to osmotic stress; IMP:PomBase.::GO:0002183; P:cytoplasmic translational initiation; NAS:PomBase.
460O74184    314   WAT1_SCHPO WD repeat-containing protein wat1 ...2110.11     37.7     22     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0031931; C:TORC1 complex; IDA:PomBase.::GO:0031932; C:TORC2 complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000226; P:microtubule cytoskeleton organization; IMP:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006397; P:mRNA processing; IMP:PomBase.::GO:0031929; P:TOR signaling cascade; TAS:PomBase.
461A4R2Q6    484   YTM1_MAGO7 Ribosome biogenesis protein YTM1 O...1240.11     37.7     22     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
462C7Z6H2    448   LIS1_NECH7 Nuclear distribution protein PAC1 ...2000.11     37.7     20     41GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
463Q5REE0    518   UTP15_PONAB U3 small nucleolar RNA-associated...1243.4     33.1     20     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
464Q5XIL8    705   DNAI1_RAT Dynein intermediate chain 1, axonem...1130.12     37.7     27     46GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
465D5GBI7    452   LIS1_TUBMM Nuclear distribution protein PAC1 ...1280.12     37.7     22     44GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
466P87177    922   YB1C_SCHPO Uncharacterized WD repeat-containi...1230.12     38.1     25     47GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
467Q4X0A9    696   SCONB_ASPFU Probable E3 ubiquitin ligase comp...1130.12     37.7     25     49
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
468B0XTS1    696   SCONB_ASPFC Probable E3 ubiquitin ligase comp...1130.12     37.7     25     49
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
469Q9I9H8    1261   APAF_DANRE Apoptotic protease-activating fact...660.12     38.1     29     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0043531; F:ADP binding; IEA:InterPro.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006952; P:defense response; IEA:InterPro.::GO:0042981; P:regulation of apoptotic process; IEA:InterPro.
470P62884    312   GBLP_LEIIN Guanine nucleotide-binding protein...1730.12     37.4     20     38
471P62883    312   GBLP_LEICH Guanine nucleotide-binding protein...1730.12     37.4     20     38
472Q1HPW4    329   EIF3I_BOMMO Eukaryotic translation initiation...1215.7     32.3     20     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
473Q5SUS0    1030   FBW10_MOUSE F-box/WD repeat-containing protei...1090.12     38.1     25     44
474A1CF18    435   LIS12_ASPCL Nuclear distribution protein nudF...1110.18     37.4     24     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
475Q0CY32    673   SCONB_ASPTN Probable E3 ubiquitin ligase comp...1130.12     37.7     25     48
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
476P93340    326   GBLP_NICPL Guanine nucleotide-binding protein...1023.8     32.7     24     54
477P93563    377   GBB_SOLTU Guanine nucleotide-binding protein ...1352.9     33.1     26     39
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
478Q9UTC7    462   YIDC_SCHPO Uncharacterized WD repeat-containi...1780.36     36.2     25     40GO:0005829; C:cytosol; IDA:PomBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
479Q63100    643   DC1I1_RAT Cytoplasmic dynein 1 intermediate c...1350.14     37.7     27     47GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005868; C:cytoplasmic dynein complex; ISS:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0048471; C:perinuclear region of cytoplasm; IDA:HGNC.::GO:0000922; C:spindle pole; ISS:UniProtKB.::GO:0031982; C:vesicle; ISS:UniProtKB.
GO:0008017; F:microtubule binding; IDA:HGNC.::GO:0003777; F:microtubule motor activity; IDA:HGNC.
GO:0047496; P:vesicle transport along microtubule; IDA:HGNC.
480Q25306    312   GBLP_LEIMA Guanine nucleotide-binding protein...1730.14     37.4     20     38
481Q59WJ4    543   PFS2_CANAL Polyadenylation factor subunit 2 O...1150.15     37.4     23     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
records
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