Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL018W
Length:
329
Number of sequences:
5887
Description:
YKL018W SWD2 SGDID:S000001501, Chr XI from 404102-405091, Genome Release 64-1-1, Verified ORF, "Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lys 4 and is involved in telomeric silencing; subunit of CPF (cleavage and polyadenylation factor), a complex involved in RNAP II transcription termination"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
331Q291L9    411   LIS1_DROPS Lissencephaly-1 homolog OS=Drosoph...580.17     37     33     48GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
332B4GAJ1    411   LIS1_DROPE Lissencephaly-1 homolog OS=Drosoph...580.17     37     33     48GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
333Q6PE01    358   SNR40_MOUSE U5 small nuclear ribonucleoprotei...2350.012     40.8     22     38
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
334P38123    315   SWD3_YEAST COMPASS component SWD3 OS=Saccharo...1220.4     35.8     24     45GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0051568; P:histone H3-K4 methylation; IDA:SGD.::GO:0000723; P:telomere maintenance; IMP:SGD.
335A2RRU3    528   UTP15_RAT U3 small nucleolar RNA-associated p...1245.9     32.3     20     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
336B4LQ21    411   LIS1_DROVI Lissencephaly-1 homolog OS=Drosoph...580.15     37.4     33     48GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
337Q7RY68    660   PFS2_NEUCR Polyadenylation factor subunit 2 O...1160.013     40.8     20     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
338Q7ZVA0    513   SMU1_DANRE WD40 repeat-containing protein SMU...1550.013     40.8     22     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
339Q9P7I3    651   MDV1_SCHPO Mitochondrial division protein 1 O...580.013     40.8     38     57GO:0030015; C:CCR4-NOT core complex; NAS:PomBase.::GO:0005741; C:mitochondrial outer membrane; ISS:PomBase.
GO:0051020; F:GTPase binding; NAS:PomBase.
GO:0000266; P:mitochondrial fission; ISS:PomBase.::GO:0000002; P:mitochondrial genome maintenance; ISS:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:PomBase.::GO:0006354; P:transcription elongation, DNA-dependent; IC:PomBase.
340Q24338    425   ESC_DROME Polycomb protein esc OS=Drosophila ...500.013     40.8     34     64GO:0035098; C:ESC/E(Z) complex; IDA:FlyBase.::GO:0000790; C:nuclear chromatin; ISS:UniProtKB.
GO:0042802; F:identical protein binding; IPI:IntAct.
GO:0006342; P:chromatin silencing; IPI:FlyBase.::GO:0048096; P:chromatin-mediated maintenance of transcription; NAS:UniProtKB.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0070734; P:histone H3-K27 methylation; IMP:FlyBase.::GO:0051567; P:histone H3-K9 methylation; IC:GOC.::GO:0007517; P:muscle organ development; IMP:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
341Q54RP0    648   AGTA_DICDI UDP-galactose:fucoside alpha-3-gal...1760.015     40.8     26     42GO:0005737; C:cytoplasm; TAS:dictyBase.
GO:0004381; F:fucosylgalactoside 3-alpha-galactosyltransferase activity; IEA:EC.
GO:0006486; P:protein glycosylation; IDA:dictyBase.
342Q8N9V3    476   WSDU1_HUMAN WD repeat, SAM and U-box domain-c...1530.015     40.4     27     42GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
343Q54H44    325   WDR83_DICDI WD repeat domain-containing prote...1170.015     40.4     23     50GO:0005737; C:cytoplasm; ISS:UniProtKB.
344Q6ED65    1977   EMAL5_RAT Echinoderm microtubule-associated p...1140.016     40.8     27     44GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
345Q5VTH9    848   WDR78_HUMAN WD repeat-containing protein 78 O...1590.016     40.8     27     43
346Q810D6    446   GRWD1_MOUSE Glutamate-rich WD repeat-containi...1070.016     40.4     26     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
347Q2HJH6    358   SNR40_BOVIN U5 small nuclear ribonucleoprotei...2350.016     40.4     22     38GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
348Q5ZMC3    476   WSDU1_CHICK WD repeat, SAM and U-box domain-c...1760.016     40.4     24     41GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
349Q8BQM8    1977   EMAL5_MOUSE Echinoderm microtubule-associated...1381.3     34.7     22     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
350B4MY65    409   LIS1_DROWI Lissencephaly-1 homolog OS=Drosoph...580.078     38.1     33     50GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
351Q5B8Y3    336   EIF3I_EMENI Eukaryotic translation initiation...1480.017     40     27     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
352P54703    654   DYIN_DICDI Cytoplasmic dynein 1 intermediate ...1350.017     40.4     28     47GO:0005813; C:centrosome; TAS:dictyBase.::GO:0030286; C:dynein complex; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
353O22469    424   MSI3_ARATH WD-40 repeat-containing protein MS...1900.017     40.4     24     45GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
354P91341    910   PWP2_CAEEL Periodic tryptophan protein 2 homo...1360.017     40.4     17     49
GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.
355Q05BV3    1969   EMAL5_HUMAN Echinoderm microtubule-associated...1291.2     34.7     25     44GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
356Q1JQD2    446   GRWD1_BOVIN Glutamate-rich WD repeat-containi...1070.018     40.4     25     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
357Q9LV28    326   GPLPC_ARATH Guanine nucleotide-binding protei...2540.018     40     20     41GO:0005730; C:nucleolus; IDA:TAIR.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071215; P:cellular response to abscisic acid stimulus; IEP:TAIR.::GO:0048364; P:root development; IGI:TAIR.::GO:0048367; P:shoot development; IGI:TAIR.
358Q7RY30    453   LIS11_NEUCR Nuclear distribution protein pac1...2050.018     40.4     21     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
359Q3SZ25    441   EED_BOVIN Polycomb protein EED OS=Bos taurus ...500.018     40.4     36     68GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
360Q921E6    441   EED_MOUSE Polycomb protein EED OS=Mus musculu...500.019     40     36     68GO:0035098; C:ESC/E(Z) complex; IDA:UniProtKB.::GO:0045120; C:pronucleus; IDA:MGI.::GO:0001739; C:sex chromatin; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.
GO:0006349; P:regulation of gene expression by genetic imprinting; IMP:MGI.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
361O75530    441   EED_HUMAN Polycomb protein EED OS=Homo sapien...500.019     40     36     68GO:0035098; C:ESC/E(Z) complex; IDA:UniProtKB.
GO:0042054; F:histone methyltransferase activity; IDA:MGI.::GO:0042802; F:identical protein binding; IPI:IntAct.
GO:0045892; P:negative regulation of transcription, DNA-dependent; NAS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
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