Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL018W
Length:
329
Number of sequences:
5887
Description:
YKL018W SWD2 SGDID:S000001501, Chr XI from 404102-405091, Genome Release 64-1-1, Verified ORF, "Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lys 4 and is involved in telomeric silencing; subunit of CPF (cleavage and polyadenylation factor), a complex involved in RNAP II transcription termination"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
271B6QC56    459   LIS11_PENMQ Nuclear distribution protein nudF...2062.3     33.5     20     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
272Q5U2W5    800   TBL3_RAT Transducin beta-like protein 3 OS=Ra...1251.9     34.3     20     36GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:InterPro.
273Q2KJJ5    800   TBL3_BOVIN Transducin beta-like protein 3 OS=...1250.027     40     20     37GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:InterPro.
274P74598    348   Y1491_SYNY3 Uncharacterized WD repeat-contain...2830.004     42.4     20     36GO:0030288; C:outer membrane-bounded periplasmic space; IDA:UniProtKB.
275O18640    318   GBLP_DROME Guanine nucleotide-binding protein...2070.3     36.2     22     42GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.
GO:0042335; P:cuticle development; IMP:FlyBase.::GO:0007626; P:locomotory behavior; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase.::GO:0048477; P:oogenesis; IMP:FlyBase.::GO:0018991; P:oviposition; IMP:FlyBase.::GO:0035220; P:wing disc development; IMP:FlyBase.
276Q9Y6I7    421   WSB1_HUMAN WD repeat and SOCS box-containing ...1280.012     40.8     24     43GO:0005622; C:intracellular; IDA:LIFEdb.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
277O13286    556   SRW1_SCHPO WD repeat-containing protein srw1 ...1610.004     42.4     22     43GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0007092; P:activation of mitotic anaphase-promoting complex activity; TAS:PomBase.::GO:0030996; P:cell cycle arrest in response to nitrogen starvation; IMP:PomBase.::GO:0008054; P:cyclin catabolic process; IMP:PomBase.::GO:0045736; P:negative regulation of cyclin-dependent protein kinase activity; IC:PomBase.::GO:0031137; P:regulation of conjugation with cellular fusion; IMP:PomBase.
278Q4P9P9    453   LIS1_USTMA Nuclear distribution protein PAC1 ...530.32     36.2     32     57GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
279A1CJY4    340   EIF3I_ASPCL Eukaryotic translation initiation...1520.004     42     26     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
280A4R3M4    461   LIS1_MAGO7 Nuclear distribution protein PAC1 ...2150.77     35     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
281P40968    455   PRP17_YEAST Pre-mRNA-processing factor 17 OS=...2340.031     39.7     24     44GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0000350; P:generation of catalytic spliceosome for second transesterification step; IMP:SGD.::GO:0000389; P:nuclear mRNA 3'-splice site recognition; IGI:SGD.::GO:0000348; P:nuclear mRNA branch site recognition; IGI:SGD.
282Q54ED4    482   GRWD1_DICDI Glutamate-rich WD repeat-containi...1500.004     42.4     23     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
283Q9C4Z6    326   GPLPB_ARATH Guanine nucleotide-binding protei...1418.3     31.6     21     44GO:0022626; C:cytosolic ribosome; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071215; P:cellular response to abscisic acid stimulus; IEP:TAIR.::GO:0006417; P:regulation of translation; IGI:TAIR.::GO:0042254; P:ribosome biogenesis; IGI:TAIR.::GO:0048364; P:root development; IGI:TAIR.::GO:0009845; P:seed germination; IGI:TAIR.::GO:0048367; P:shoot development; IGI:TAIR.
284Q5XI13    445   GRWD1_RAT Glutamate-rich WD repeat-containing...1070.005     42     27     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
285Q55FR9    1221   COPA_DICDI Coatomer subunit alpha OS=Dictyost...1150.005     42.4     23     48GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
286Q6NLV4    647   FY_ARATH Flowering time control protein FY OS...1110.17     37.4     23     40GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IGI:TAIR.::GO:0009909; P:regulation of flower development; IMP:TAIR.
287Q6ZMW3    1958   EMAL6_HUMAN Echinoderm microtubule-associated...1390.012     41.2     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
288Q5BE22    452   PRP46_EMENI Pre-mRNA-splicing factor prp46 OS...851     34.7     27     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
289Q09406    534   A16L2_CAEEL Autophagic-related protein 16.2 O...2860.005     42     22     42
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0071688; P:striated muscle myosin thick filament assembly; IMP:WormBase.
290C5FP68    674   SCONB_ARTOC Probable E3 ubiquitin ligase comp...1340.005     42     27     48
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
291C5FWH1    461   LIS1_ARTOC Nuclear distribution protein PAC1 ...2480.11     37.7     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
292A2QEV8    337   EIF3I_ASPNC Eukaryotic translation initiation...1490.006     41.6     25     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
293Q9Y4P3    447   TBL2_HUMAN Transducin beta-like protein 2 OS=...1800.006     42     23     46
294Q4QR85    342   MEP50_RAT Methylosome protein 50 OS=Rattus no...1030.006     41.6     29     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
295B4JWA1    411   LIS1_DROGR Lissencephaly-1 homolog OS=Drosoph...580.071     38.5     33     50GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
296P49846    704   TAF5_DROME Transcription initiation factor TF...1623     33.5     20     40GO:0000124; C:SAGA complex; IPI:FlyBase.::GO:0005669; C:transcription factor TFIID complex; IDA:FlyBase.
GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IDA:GOC.
297A8IZG4    352   CIAO1_CHLRE Probable cytosolic iron-sulfur pr...742.6     33.5     20     43
298Q5ZK69    392   PAAF1_CHICK Proteasomal ATPase-associated fac...1750.006     41.6     24     38GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
299Q96MR6    1250   WDR65_HUMAN WD repeat-containing protein 65 O...2660.006     42     21     42
300Q5U4D9    341   THOC6_MOUSE THO complex subunit 6 homolog OS=...490.006     41.6     37     57
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
301Q55563    1693   Y163_SYNY3 Uncharacterized WD repeat-containi...1150.2     37.4     24     46
GO:0005488; F:binding; IEA:InterPro.
records
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