Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YKL018W
Length:
329
Number of sequences:
5887
Description:
YKL018W SWD2 SGDID:S000001501, Chr XI from 404102-405091, Genome Release 64-1-1, Verified ORF, "Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lys 4 and is involved in telomeric silencing; subunit of CPF (cleavage and polyadenylation factor), a complex involved in RNAP II transcription termination"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
181Q2TBP4    407   POC1A_BOVIN POC1 centriolar protein homolog A...1780.074     38.5     21     39GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.
182Q54PE0    922   PWP2_DICDI Periodic tryptophan protein 2 homo...2110.0003     46.2     22     45GO:0005829; C:cytosol; ISS:dictyBase.::GO:0005730; C:nucleolus; ISS:dictyBase.
GO:0030515; F:snoRNA binding; ISS:dictyBase.
GO:0006364; P:rRNA processing; ISS:dictyBase.
183O00628    323   PEX7_HUMAN Peroxisomal targeting signal 2 rec...1200.0003     45.4     23     50GO:0005777; C:peroxisome; IDA:UniProtKB.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; IDA:UniProtKB.
GO:0008611; P:ether lipid biosynthetic process; IMP:UniProtKB.::GO:0016558; P:protein import into peroxisome matrix; IMP:UniProtKB.
184Q5R5W8    340   GBB1_PONAB Guanine nucleotide-binding protein...1710.0004     45.4     26     42
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
185Q5ZMA2    505   PRP19_CHICK Pre-mRNA-processing factor 19 OS=...2090.0004     45.8     22     37GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
186Q8JZX3    405   POC1A_MOUSE POC1 centriolar protein homolog A...1780.045     38.9     21     40GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.
187Q9QXE7    527   TBL1X_MOUSE F-box-like/WD repeat-containing p...1481.5     34.3     24     39GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:MGI.::GO:0003714; F:transcription corepressor activity; IMP:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.
GO:0045444; P:fat cell differentiation; IMP:MGI.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:MGI.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:MGI.::GO:0043627; P:response to estrogen stimulus; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
188Q9UT73    576   YIPH_SCHPO Uncharacterized WD repeat-containi...2810.0004     45.4     23     42GO:0043234; C:protein complex; NAS:PomBase.
GO:0000132; P:establishment of mitotic spindle orientation; ISS:PomBase.
189Q12417    451   PRP46_YEAST Pre-mRNA-splicing factor PRP46 OS...1250.12     37.7     24     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
190A0JP70    1848   WDR90_XENTR WD repeat-containing protein 90 O...2230.0005     45.8     24     37
191Q5RBZ2    342   MEP50_PONAB Methylosome protein 50 OS=Pongo a...1030.0005     45.1     32     46GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
192Q6GPC6    522   TB1RB_XENLA F-box-like/WD repeat-containing p...1481.9     33.9     22     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
193Q7SZM9    519   TB1RA_XENLA F-box-like/WD repeat-containing p...1481.8     33.9     22     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
194Q8C0J2    607   A16L1_MOUSE Autophagy-related protein 16-1 OS...2560.0005     45.1     21     40GO:0000421; C:autophagic vacuole membrane; IDA:MGI.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0000045; P:autophagic vacuole assembly; TAS:MGI.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
195O13615    473   PRP46_SCHPO Pre-mRNA-splicing factor prp5 OS=...1140.59     35.4     28     44GO:0005681; C:spliceosomal complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IMP:PomBase.
196Q9BZK7    514   TBL1R_HUMAN F-box-like/WD repeat-containing p...1481.9     33.9     22     38GO:0005876; C:spindle microtubule; IDA:UniProtKB.::GO:0017053; C:transcriptional repressor complex; IDA:UniProtKB.
GO:0008013; F:beta-catenin binding; IPI:UniProtKB.::GO:0042393; F:histone binding; IDA:UniProtKB.::GO:0047485; F:protein N-terminus binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.::GO:0044212; F:transcription regulatory region DNA binding; IDA:UniProtKB.
GO:0060070; P:canonical Wnt receptor signaling pathway; IMP:UniProtKB.::GO:0044255; P:cellular lipid metabolic process; TAS:Reactome.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
197Q66HB3    777   IFT80_RAT Intraflagellar transport protein 80...1530.0006     45.1     25     46GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
198O74319    642   TAF73_SCHPO Transcription initiation factor T...1249     32     22     42GO:0005829; C:cytosol; IDA:PomBase.::GO:0005669; C:transcription factor TFIID complex; TAS:PomBase.
GO:0000991; F:core RNA polymerase II binding transcription factor activity; IC:PomBase.
GO:0030071; P:regulation of mitotic metaphase/anaphase transition; IGI:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:PomBase.
199Q676U5    607   A16L1_HUMAN Autophagy-related protein 16-1 OS...2560.0006     45.1     21     40GO:0005776; C:autophagic vacuole; ISS:UniProtKB.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000045; P:autophagic vacuole assembly; NAS:UniProtKB.::GO:0051260; P:protein homooligomerization; NAS:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
200Q8K057    777   IFT80_MOUSE Intraflagellar transport protein ...1530.0006     45.1     25     46GO:0005813; C:centrosome; IDA:MGI.::GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
201Q8BHJ5    514   TBL1R_MOUSE F-box-like/WD repeat-containing p...1482.1     33.9     22     38
GO:0003714; F:transcription corepressor activity; IMP:MGI.::GO:0044212; F:transcription regulatory region DNA binding; IDA:BHF-UCL.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:BHF-UCL.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
202Q93794    587   SEL10_CAEEL F-box/WD repeat-containing protei...1160.0007     45.1     25     44GO:0030424; C:axon; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:WormBase.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0046660; P:female sex differentiation; IMP:UniProtKB.::GO:0045746; P:negative regulation of Notch signaling pathway; IGI:UniProtKB.
203Q3Y8L7    446   WDR69_CHLRE Outer row dynein assembly protein...3020.001     43.9     18     40GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0035086; C:flagellar axoneme; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
204Q96J01    351   THOC3_HUMAN THO complex subunit 3 OS=Homo sap...800.0007     44.7     30     59GO:0000346; C:transcription export complex; IDA:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0046784; P:intronless viral mRNA export from host nucleus; IDA:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
205Q29RH4    351   THOC3_BOVIN THO complex subunit 3 OS=Bos taur...2320.0007     44.3     21     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
206Q8NBT0    407   POC1A_HUMAN POC1 centriolar protein homolog A...1395.3     32.3     22     42GO:0005814; C:centriole; IDA:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.
207Q5FVN8    476   WSDU1_RAT WD repeat, SAM and U-box domain-con...1520.0008     44.7     27     42GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
208Q8VE80    351   THOC3_MOUSE THO complex subunit 3 OS=Mus musc...800.0008     44.3     30     59
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
209A7THX0    706   MDV1_VANPO Mitochondrial division protein 1 O...1680.0008     44.7     26     45GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
210P0CS36    435   HAT2_CRYNJ Histone acetyltransferase type B s...1070.0009     44.3     29     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
211P0CS37    435   HAT2_CRYNB Histone acetyltransferase type B s...1070.0009     44.3     29     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
records
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