Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YJR119C
Length:
728
Number of sequences:
5887
Description:
YJR119C JHD2 SGDID:S000003880, Chr X from 646490-644304, Genome Release 64-1-1, reverse complement, Verified ORF, "JmjC domain family histone demethylase specific for H3-K4 (histone H3 Lys4); removes methyl groups specifically added by Set1p methyltransferase; protein levels regulated by Not4p (E3 ubiquitin ligase) polyubiquitin-mediated degradation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q9QX66    387   DPF1_MOUSE Zinc finger protein neuro-d4 OS=Mu...470.000005     53.1     38     64GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0071565; C:nBAF complex; IDA:UniProtKB.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007399; P:nervous system development; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
92P58268    405   REQU_CHICK Zinc finger protein ubi-d4 OS=Gall...470.000005     53.1     36     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
93Q9W636    366   REQUB_XENLA Zinc finger protein ubi-d4 B OS=X...470.000006     52.8     38     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
94P58267    380   DPF1_CHICK Zinc finger protein neuro-d4 OS=Ga...460.000007     52.4     37     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007399; P:nervous system development; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
95A9LMC0    391   DPF3_DANRE Zinc finger protein DPF3 OS=Danio ...460.000009     52.4     37     63GO:0016514; C:SWI/SNF complex; ISS:ZFIN.
GO:0042393; F:histone binding; ISS:ZFIN.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0055008; P:cardiac muscle tissue morphogenesis; IMP:ZFIN.::GO:0016568; P:chromatin modification; ISS:ZFIN.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IMP:ZFIN.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
96Q12830    3046   BPTF_HUMAN Nucleosome-remodeling factor subun...490.000009     53.1     41     57GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0016589; C:NURF complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0043565; F:sequence-specific DNA binding; IDA:HGNC.::GO:0008134; F:transcription factor binding; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007420; P:brain development; IMP:HGNC.::GO:0006338; P:chromatin remodeling; IDA:HGNC.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:HGNC.::GO:0006351; P:transcription, DNA-dependent; IMP:HGNC.
97Q9VWF2    2006   SAYP_DROME Supporter of activation of yellow ...450.00001     53.1     44     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000791; C:euchromatin; IDA:UniProtKB.::GO:0000792; C:heterochromatin; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0005701; C:polytene chromosome chromocenter; IDA:UniProtKB.
GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016458; P:gene silencing; IMP:UniProtKB.::GO:0007480; P:imaginal disc-derived leg morphogenesis; IMP:FlyBase.::GO:0031936; P:negative regulation of chromatin silencing; IGI:FlyBase.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IMP:UniProtKB.
98Q04779    684   RCO1_YEAST Transcriptional regulatory protein...610.00001     52.8     43     56GO:0033698; C:Rpd3L complex; IDA:SGD.::GO:0032221; C:Rpd3S complex; IDA:SGD.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016575; P:histone deacetylation; IMP:SGD.::GO:0060195; P:negative regulation of antisense RNA transcription; IMP:SGD.::GO:0030174; P:regulation of DNA-dependent DNA replication initiation; IMP:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IGI:SGD.
99Q09477    372   YP99_CAEEL Uncharacterized zinc finger protei...510.00001     51.6     35     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
100Q99PP7    1142   TRI33_MOUSE E3 ubiquitin-protein ligase TRIM3...630.00002     52     41     54GO:0005634; C:nucleus; IDA:MGI.
GO:0070410; F:co-SMAD binding; ISS:BHF-UCL.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0070412; F:R-SMAD binding; ISS:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0030514; P:negative regulation of BMP signaling pathway; ISS:UniProtKB.::GO:0016567; P:protein ubiquitination; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0017015; P:regulation of transforming growth factor beta receptor signaling pathway; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
101Q5SPL2    1003   PHF12_MOUSE PHD finger protein 12 OS=Mus musc...420.063     40.4     40     52GO:0017053; C:transcriptional repressor complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
102Q9W638    388   REQUA_XENLA Zinc finger protein ubi-d4 A OS=X...460.00003     50.8     37     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
103Q6E2N3    1163   TRI33_DANRE E3 ubiquitin-protein ligase TRIM3...1140.00003     51.2     30     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
104P58270    427   DPF3_CHICK Zinc finger protein DPF3 OS=Gallus...460.00004     50.4     37     63GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
105Q9UPN9    1127   TRI33_HUMAN E3 ubiquitin-protein ligase TRIM3...630.00005     50.8     40     54GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0070410; F:co-SMAD binding; IPI:BHF-UCL.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0070412; F:R-SMAD binding; IPI:BHF-UCL.::GO:0008270; F:zinc ion binding; NAS:UniProtKB.
GO:0030514; P:negative regulation of BMP signaling pathway; IDA:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; NAS:UniProtKB.::GO:0016567; P:protein ubiquitination; IDA:UniProtKB.::GO:0017015; P:regulation of transforming growth factor beta receptor signaling pathway; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
106O94691    752   JMJ3_SCHPO Lid2 complex component jmj3 OS=Sch...1160.00005     50.4     30     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0048189; C:Lid2 complex; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.
GO:0051864; F:histone demethylase activity (H3-K36 specific); ISS:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IC:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
107Q92785    391   REQU_HUMAN Zinc finger protein ubi-d4 OS=Homo...470.00006     49.7     34     60GO:0005813; C:centrosome; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0008624; P:induction of apoptosis by extracellular signals; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
108P56163    397   DPF1_RAT Zinc finger protein neuro-d4 OS=Ratt...330.00008     49.3     48     70GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0071565; C:nBAF complex; ISS:UniProtKB.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007399; P:nervous system development; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
109Q96QT6    1004   PHF12_HUMAN PHD finger protein 12 OS=Homo sap...420.052     40.8     40     52GO:0017053; C:transcriptional repressor complex; IDA:UniProtKB.
GO:0035091; F:phosphatidylinositol binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
110Q61103    391   REQU_MOUSE Zinc finger protein ubi-d4 OS=Mus ...470.00008     49.3     34     60GO:0005634; C:nucleus; IDA:MGI.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
111Q92782    380   DPF1_HUMAN Zinc finger protein neuro-d4 OS=Ho...330.00009     48.9     48     70GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0071565; C:nBAF complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006917; P:induction of apoptosis; TAS:ProtInc.::GO:0007399; P:nervous system development; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
112Q0P4S5    817   JADE3_XENTR Protein Jade-3 OS=Xenopus tropica...1660.0001     49.7     25     40
GO:0008270; F:zinc ion binding; IEA:InterPro.
113O94880    888   PHF14_HUMAN PHD finger protein 14 OS=Homo sap...780.0001     49.3     32     50
GO:0008270; F:zinc ion binding; IEA:InterPro.
114Q63ZP1    506   PHF10_XENLA PHD finger protein 10 OS=Xenopus ...450.0001     48.9     38     64GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
115Q2T9V9    410   PHF10_BOVIN PHD finger protein 10 OS=Bos taur...450.0002     48.5     38     62GO:0071564; C:npBAF complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
116Q9W0T1    2669   NU301_DROME Nucleosome-remodeling factor subu...480.0002     48.9     38     56GO:0016589; C:NURF complex; IDA:FlyBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0016922; F:ligand-dependent nuclear receptor binding; IPI:FlyBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0035076; P:ecdysone receptor-mediated signaling pathway; IGI:FlyBase.::GO:0030097; P:hemopoiesis; IMP:FlyBase.::GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:FlyBase.::GO:0042766; P:nucleosome mobilization; IDA:FlyBase.::GO:0045747; P:positive regulation of Notch signaling pathway; IMP:FlyBase.::GO:0035073; P:pupariation; IMP:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IDA:FlyBase.
117Q4V7A6    497   PHF10_RAT PHD finger protein 10 OS=Rattus nor...450.0002     48.5     38     62GO:0071564; C:npBAF complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
118Q8WUB8    498   PHF10_HUMAN PHD finger protein 10 OS=Homo sap...450.0002     48.1     38     62GO:0071564; C:npBAF complex; ISS:UniProtKB.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
119O94400    571   YQF7_SCHPO PHD and RING finger domain-contain...650.0002     48.5     31     62GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0008270; F:zinc ion binding; IEA:InterPro.
120Q9D8M7    497   PHF10_MOUSE PHD finger protein 10 OS=Mus musc...450.0002     48.1     38     62GO:0071564; C:npBAF complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007399; P:nervous system development; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
121O15016    1216   TRI66_HUMAN Tripartite motif-containing prote...830.0002     48.5     29     43GO:0016235; C:aggresome; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
GO:0008270; F:zinc ion binding; IEA:InterPro.
records
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