Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YJR084W
Length:
423
Number of sequences:
5887
Description:
YJR084W YJR084W SGDID:S000003844, Chr X from 583733-585004, Genome Release 64-1-1, Verified ORF, "Protein that forms a complex with Thp3p; may have a role in transcription elongation and/or mRNA splicing; identified as a COP9 signalosome component but phenotype and interactions suggest it may not be involved with the signalosome"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P47130    423   CSN12_YEAST Cop9 signalosome complex subunit ...4230     877     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0008180; C:signalosome; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000754; P:adaptation of signaling pathway by response to pheromone involved in conjugation with cellular fusion; IMP:SGD.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
2Q6FJ48    449   CSN12_CANGA COP9 signalosome complex subunit ...4517e-60     207     31     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0008180; C:signalosome; IEA:UniProtKB-KW.
3Q75BU2    412   CSN12_ASHGO COP9 signalosome complex subunit ...4368e-58     201     33     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0008180; C:signalosome; IEA:UniProtKB-KW.
4Q6CPB1    424   CSN12_KLULA COP9 signalosome complex subunit ...4042e-47     173     30     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0008180; C:signalosome; IEA:UniProtKB-KW.
5P0CR48    403   CSN12_CRYNJ Protein CSN12 homolog OS=ATCC MYA...3541e-24     107     25     46
6P0CR49    403   CSN12_CRYNB Protein CSN12 homolog OS=(Filobas...3541e-24     107     25     46
7Q6C1L4    396   CSN12_YARLI Protein CSN12 homolog OS=lipolyti...3559e-23     102     25     45
8Q4IMN9    502   CSN12_GIBZE Protein CSN12 homolog OS=(Wheat h...3004e-22     102     26     45
9Q6BGR7    438   CSN12_DEBHA Protein CSN12 homolog OS=0083 / I...3824e-22     100     28     46
10Q4P8T5    454   CSN12_USTMA Protein CSN12 homolog OS=Ustilago...3051e-19     94     25     46
11Q4WJX0    455   CSN12_ASPFU Protein CSN12 homolog OS=A1100) (...3045e-18     89.4     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0008180; C:signalosome; IEA:UniProtKB-KW.
12O13873    423   CSN12_SCHPO Protein CSN12 homolog OS=Schizosa...3081e-17     88.2     25     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0000338; P:protein deneddylation; IC:PomBase.
13Q7SD63    461   CSN12_NEUCR Protein CSN12 homolog OS=1257 / F...3192e-17     87.8     27     45
14Q5JVF3    399   PCID2_HUMAN PCI domain-containing protein 2 O...3371e-16     85.1     25     45
GO:0043066; P:negative regulation of apoptotic process; IMP:UniProtKB.::GO:2000117; P:negative regulation of cysteine-type endopeptidase activity; IMP:UniProtKB.::GO:0090267; P:positive regulation of mitotic cell cycle spindle assembly checkpoint; IMP:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0043488; P:regulation of mRNA stability; IMP:UniProtKB.::GO:0048536; P:spleen development; ISS:UniProtKB.
15Q54PX7    430   PCID2_DICDI PCI domain-containing protein 2 h...3054e-16     83.6     25     45
16Q95QU0    413   PCID2_CAEEL PCI domain-containing protein 2 h...3440.000000000000008     79.3     23     43
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
17Q5U3P0    399   PCID2_DANRE PCI domain-containing protein 2 O...3390.00000000000002     78.6     24     44
18Q60YJ7    413   PCID2_CAEBR PCI domain-containing protein 2 h...3470.00000000000002     78.2     24     44
19Q8BFV2    399   PCID2_MOUSE PCI domain-containing protein 2 O...3370.00000000000005     77     25     45
GO:0043066; P:negative regulation of apoptotic process; IMP:UniProtKB.::GO:0045579; P:positive regulation of B cell differentiation; IMP:UniProtKB.::GO:0090267; P:positive regulation of mitotic cell cycle spindle assembly checkpoint; IMP:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0043488; P:regulation of mRNA stability; ISS:UniProtKB.::GO:0048536; P:spleen development; IMP:UniProtKB.
20Q2TBN6    408   PCID2_BOVIN PCI domain-containing protein 2 O...3370.0000000000001     75.9     25     46
GO:0043066; P:negative regulation of apoptotic process; ISS:UniProtKB.::GO:2000117; P:negative regulation of cysteine-type endopeptidase activity; ISS:UniProtKB.::GO:0090267; P:positive regulation of mitotic cell cycle spindle assembly checkpoint; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0043488; P:regulation of mRNA stability; ISS:UniProtKB.::GO:0048536; P:spleen development; ISS:UniProtKB.
21Q5FWP8    399   PCID2_XENLA PCI domain-containing protein 2 O...3300.0000000000001     75.5     22     45
22Q9VTL1    395   PCID2_DROME PCI domain-containing protein 2 h...2980.000000004     61.6     22     43GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0005844; C:polysome; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006406; P:mRNA export from nucleus; IDA:UniProtKB.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
23Q9Y820    442   YON7_SCHPO PCI domain-containing protein C110...3020.000006     52     20     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0005643; C:nuclear pore; ISS:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.::GO:0000346; C:transcription export complex; ISS:PomBase.
GO:0003690; F:double-stranded DNA binding; ISS:PomBase.::GO:0003723; F:RNA binding; ISS:PomBase.
GO:0006406; P:mRNA export from nucleus; ISS:PomBase.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:PomBase.
24Q10XM3    1059   IF2_TRIEI Translation initiation factor IF-2 ...468.4     32.7     28     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
records
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