Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YJR068W
Length:
353
Number of sequences:
5887
Description:
YJR068W RFC2 SGDID:S000003829, Chr X from 567643-568704, Genome Release 64-1-1, Verified ORF, "Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
961E2R222    432   PCH2_CANFA Pachytene checkpoint protein 2 hom...1456.3     32.3     26     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0006302; P:double-strand break repair; ISS:UniProtKB.::GO:0048477; P:oogenesis; ISS:UniProtKB.::GO:0007131; P:reciprocal meiotic recombination; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0007130; P:synaptonemal complex assembly; ISS:UniProtKB.
962Q7Z333    2677   SETX_HUMAN Probable helicase senataxin OS=Hom...446.3     32.7     39     59GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IC:UniProtKB.::GO:0003678; F:DNA helicase activity; TAS:UniProtKB.
GO:0008219; P:cell death; IEA:UniProtKB-KW.::GO:0006302; P:double-strand break repair; IDA:UniProtKB.::GO:0006396; P:RNA processing; TAS:UniProtKB.
963Q21HN6    344   RUVB_SACD2 Holliday junction ATP-dependent DN...616.5     32.3     33     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
964Q8NXY8    818   CLPC_STAAW ATP-dependent Clp protease ATP-bin...776.7     32.3     29     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
965Q6KI22    833   LON_MYCMO Lon protease OS=Mycoplasma mobile (...1586.9     32.3     25     35GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
966O78410    819   CLPC_GUITH ATP-dependent Clp protease ATP-bin...1367     32.3     25     39GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006289; P:nucleotide-excision repair; IEA:InterPro.::GO:0019538; P:protein metabolic process; IEA:InterPro.
967B6SFA4    818   MAA3_ARATH Probable helicase MAGATAMA 3 OS=Ar...567.2     32.3     32     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0009553; P:embryo sac development; IMP:TAIR.::GO:0010183; P:pollen tube guidance; IMP:TAIR.::GO:0009875; P:pollen-pistil interaction; IMP:TAIR.
968Q9I742    902   CLPV1_PSEAE Protein ClpV1 OS=12228). GN=clpV1...557.6     32.3     29     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
969Q9MBA3    599   RAD17_ARATH Cell cycle checkpoint protein RAD...727.7     32.3     31     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006282; P:regulation of DNA repair; IMP:TAIR.
970Q83FI1    705   CLPB_TROWT Chaperone protein ClpB OS=Trophery...1217.8     32.3     27     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006950; P:response to stress; IEA:UniProtKB-KW.
971Q58576    430   PAN_METJA Proteasome-activating nucleotidase ...1017.8     32     33     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0022623; C:proteasome-activating nucleotidase complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:UniProtKB.::GO:0043273; F:CTPase activity; IDA:UniProtKB.::GO:0003924; F:GTPase activity; IDA:UniProtKB.
GO:0010498; P:proteasomal protein catabolic process; IDA:UniProtKB.::GO:0043335; P:protein unfolding; IDA:UniProtKB.
972Q7XK25    471   PCH2_ORYSJ Pachytene checkpoint protein 2 hom...408     32     40     63
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.
973A2XUN8    471   PCH2_ORYSI Pachytene checkpoint protein 2 hom...408     32     40     63
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.
974P34732    794   SEC18_CANAX Vesicular-fusion protein SEC18 OS...248     32.3     58     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
975Q83N78    699   CLPB_TROW8 Chaperone protein ClpB OS=Trophery...1218.2     32.3     27     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006950; P:response to stress; IEA:UniProtKB-KW.
976P61538    343   RUVB_TREDE Holliday junction ATP-dependent DN...618.3     32     34     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
977Q7UM33    881   CLPB_RHOBA Chaperone protein ClpB OS=Rhodopir...1768.4     32.3     26     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0016485; P:protein processing; IEA:InterPro.::GO:0009408; P:response to heat; IEA:InterPro.
978Q7A6G6    869   CLPB_STAAN Chaperone protein ClpB OS=Staphylo...1318.5     32.3     27     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0016485; P:protein processing; IEA:InterPro.::GO:0009408; P:response to heat; IEA:InterPro.
979Q99VB5    869   CLPB_STAAM Chaperone protein ClpB OS=Staphylo...1318.5     32.3     27     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0016485; P:protein processing; IEA:InterPro.::GO:0009408; P:response to heat; IEA:InterPro.
980Q8NXE7    869   CLPB_STAAW Chaperone protein ClpB OS=Staphylo...1318.6     32.3     27     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0016485; P:protein processing; IEA:InterPro.::GO:0009408; P:response to heat; IEA:InterPro.
981Q6GAV1    869   CLPB_STAAS Chaperone protein ClpB OS=Staphylo...1318.6     32.3     27     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0016485; P:protein processing; IEA:InterPro.::GO:0009408; P:response to heat; IEA:InterPro.
982Q5HHB0    869   CLPB_STAAC Chaperone protein ClpB OS=Staphylo...1318.6     32.3     27     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0016485; P:protein processing; IEA:InterPro.::GO:0009408; P:response to heat; IEA:InterPro.
983P74361    872   CLPB2_SYNY3 Chaperone protein ClpB 2 OS=Synec...548.7     32.3     35     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0016485; P:protein processing; IEA:InterPro.::GO:0009408; P:response to heat; IEA:InterPro.
984Q6GIB2    869   CLPB_STAAR Chaperone protein ClpB OS=Staphylo...1318.9     32     27     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0016485; P:protein processing; IEA:InterPro.::GO:0009408; P:response to heat; IEA:InterPro.
985Q87D00    343   RUVB_XYLFT Holliday junction ATP-dependent DN...1349     32     23     38
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
986B2I4T1    343   RUVB_XYLF2 Holliday junction ATP-dependent DN...1349     32     23     38
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
987P0C5C0    760   FTSH_MYCTU ATP-dependent zinc metalloprotease...1489     32     26     45GO:0005829; C:cytosol; IDA:MTBBASE.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IDA:MTBBASE.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0040007; P:growth; IMP:MTBBASE.::GO:0030163; P:protein catabolic process; IMP:MTBBASE.::GO:0006508; P:proteolysis; IDA:UniProtKB.
988A5U8T5    760   FTSH_MYCTA ATP-dependent zinc metalloprotease...1489     32     26     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030163; P:protein catabolic process; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
989P0A4V9    760   FTSH_MYCBO ATP-dependent zinc metalloprotease...1489     32     26     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030163; P:protein catabolic process; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
990Q8SSJ5    780   CDC48_ENCCU Cell division control protein 48 ...359.1     32     43     57GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
991A9GIS9    830   LON3_SORC5 Lon protease 3 OS=So ce56)). GN=lo...439.2     32     44     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
records
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