Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YJR068W
Length:
353
Number of sequences:
5887
Description:
YJR068W RFC2 SGDID:S000003829, Chr X from 567643-568704, Genome Release 64-1-1, Verified ORF, "Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61P53034    331   RFC2_DROME Replication factor C subunit 2 OS=...3332e-56     193     35     53GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IMP:UniProtKB.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0000077; P:DNA damage checkpoint; IMP:FlyBase.::GO:0006281; P:DNA repair; TAS:FlyBase.::GO:0000076; P:DNA replication checkpoint; IMP:FlyBase.::GO:0006271; P:DNA strand elongation involved in DNA replication; TAS:FlyBase.::GO:0016321; P:female meiosis chromosome segregation; IMP:FlyBase.::GO:0007076; P:mitotic chromosome condensation; IMP:FlyBase.
62Q5UP47    344   RFCS3_MIMIV Putative replication factor C sma...3133e-55     190     39     55
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
63P40339    323   RFC4_YEAST Replication factor C subunit 4 OS=...3321e-54     187     36     54GO:0031390; C:Ctf18 RFC-like complex; IPI:SGD.::GO:0005663; C:DNA replication factor C complex; IDA:SGD.::GO:0031391; C:Elg1 RFC-like complex; IPI:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0031389; C:Rad17 RFC-like complex; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006272; P:leading strand elongation; IDA:SGD.::GO:0006298; P:mismatch repair; TAS:SGD.::GO:0007062; P:sister chromatid cohesion; IPI:SGD.
64Q8SQM0    309   RFC4_ENCCU Replication factor C subunit 4 OS=...2112e-47     169     42     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
65O57852    855   RFCS_PYRHO Replication factor C small subunit...560.0000000000002     74.7     52     71
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
66Q8U4J3    852   RFCS_PYRFU Replication factor C small subunit...560.0000000000009     73.2     50     71
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
67Q5JHP2    866   RFCS_PYRKO Replication factor C small subunit...620.0000000000005     73.9     47     69
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
68Q18E75    649   RFCS_HALWD Replication factor C small subunit...520.000003     52.8     40     60
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
69Q8TZC4    635   RFCS_METKA Replication factor C small subunit...802e-17     86.7     49     68
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
70Q54BN3    347   RFC3_DICDI Probable replication factor C subu...2371e-30     123     31     50GO:0005663; C:DNA replication factor C complex; ISS:dictyBase.::GO:0031391; C:Elg1 RFC-like complex; ISS:dictyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0031389; C:Rad17 RFC-like complex; ISS:dictyBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006272; P:leading strand elongation; ISS:dictyBase.::GO:0006298; P:mismatch repair; ISS:dictyBase.
71Q8X082    352   RFC5_NEUCR Replication factor C subunit 5 OS=...2613e-30     122     31     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
72P38251    354   RFC5_YEAST Replication factor C subunit 5 OS=...3491e-28     118     27     47GO:0031390; C:Ctf18 RFC-like complex; IPI:SGD.::GO:0005663; C:DNA replication factor C complex; IDA:SGD.::GO:0031391; C:Elg1 RFC-like complex; IPI:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0031389; C:Rad17 RFC-like complex; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006272; P:leading strand elongation; IDA:SGD.::GO:0006298; P:mismatch repair; TAS:SGD.::GO:0007062; P:sister chromatid cohesion; IMP:SGD.
73Q2TBV1    356   RFC3_BOVIN Replication factor C subunit 3 OS=...2441e-28     117     30     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
74Q8R323    356   RFC3_MOUSE Replication factor C subunit 3 OS=...2443e-28     117     30     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
75P40938    356   RFC3_HUMAN Replication factor C subunit 3 OS=...2443e-28     117     30     47GO:0005663; C:DNA replication factor C complex; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003689; F:DNA clamp loader activity; TAS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0000075; P:cell cycle checkpoint; TAS:Reactome.::GO:0006271; P:DNA strand elongation involved in DNA replication; TAS:Reactome.::GO:0000731; P:DNA synthesis involved in DNA repair; TAS:UniProtKB.::GO:0006297; P:nucleotide-excision repair, DNA gap filling; TAS:Reactome.::GO:0046683; P:response to organophosphorus; IEP:UniProtKB.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.::GO:0000722; P:telomere maintenance via recombination; TAS:Reactome.::GO:0032201; P:telomere maintenance via semi-conservative replication; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.
76O94697    358   RFC5_SCHPO Replication factor C subunit 5 OS=...2447e-26     110     31     49GO:0031390; C:Ctf18 RFC-like complex; TAS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005663; C:DNA replication factor C complex; ISS:PomBase.::GO:0031391; C:Elg1 RFC-like complex; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043596; C:nuclear replication fork; IC:PomBase.::GO:0031389; C:Rad17 RFC-like complex; TAS:PomBase.
GO:0003689; F:DNA clamp loader activity; ISS:PomBase.
GO:0006281; P:DNA repair; ISS:PomBase.::GO:0006272; P:leading strand elongation; ISS:PomBase.
77Q5UQ47    319   RFCS1_MIMIV Putative replication factor C sma...3261e-25     108     27     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
78A7I781    481   RFCL_METB6 Replication factor C large subunit...2383e-25     109     32     52
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
79Q2FQR4    483   RFCL_METHJ Replication factor C large subunit...2253e-23     103     32     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
80A3CTR4    454   RFCL_METMJ Replication factor C large subunit...2358e-23     102     31     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
81A0B6D7    467   RFCL_METTP Replication factor C large subunit...2269e-22     99.4     31     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
82Q5UQE8    370   RFCS2_MIMIV Putative replication factor C sma...2305e-20     93.2     27     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
83Q9V2G4    1437   RFCS_PYRAB Replication factor C small subunit...560.0000000000009     73.2     50     71
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.::GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:InterPro.::GO:0006260; P:DNA replication; IEA:InterPro.::GO:0016539; P:intein-mediated protein splicing; IEA:InterPro.
84O29072    479   RFCL_ARCFU Replication factor C large subunit...2261e-19     93.2     32     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
85Q8Q084    610   RFCL_METMA Replication factor C large subunit...2292e-19     92.8     28     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
86Q46AT6    642   RFCL_METBF Replication factor C large subunit...2293e-19     92.4     28     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
87P47658    597   DPO3X_MYCGE DNA polymerase III subunit gamma/...3014e-19     92     27     45GO:0009360; C:DNA polymerase III complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
88A2SQR6    476   RFCL_METLZ Replication factor C large subunit...2411e-18     90.5     30     46
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
89O57853    468   RFCL_PYRHO Replication factor C large subunit...2511e-18     90.5     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
90Q9V2G3    479   RFCL_PYRAB Replication factor C large subunit...2551e-18     90.5     28     46
GO:0005524; F:ATP binding; IEA:HAMAP.::GO:0003689; F:DNA clamp loader activity; IEA:HAMAP.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:HAMAP.
91Q8TPU4    607   RFCL_METAC Replication factor C large subunit...2292e-18     90.1     28     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
records
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