Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YJR060W
Length:
351
Number of sequences:
5887
Description:
YJR060W CBF1 SGDID:S000003821, Chr X from 548759-549814, Genome Release 64-1-1, Verified ORF, "Dual function helix-loop-helix protein; binds the motif CACRTG present at several sites including MET gene promoters and centromere DNA element I (CDEI); affects nucleosome positioning at this motif; associates with other transcription factors such as Met4p and Isw1p to mediate transcriptional activation or repression; associates with kinetochore proteins and required for efficient chromosome segregation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61Q8GZM7    478   PIF1_ARATH Transcription factor PIF1 OS=Arabi...600.52     35.8     33     60GO:0005634; C:nucleus; IDA:TAIR.
GO:0003677; F:DNA binding; IDA:TAIR.::GO:0010313; F:phytochrome binding; IDA:TAIR.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:TAIR.
GO:0015995; P:chlorophyll biosynthetic process; IMP:TAIR.::GO:0009740; P:gibberellic acid mediated signaling pathway; IMP:TAIR.::GO:0006783; P:heme biosynthetic process; IMP:TAIR.::GO:0009959; P:negative gravitropism; IMP:TAIR.::GO:0010100; P:negative regulation of photomorphogenesis; IMP:TAIR.::GO:0010187; P:negative regulation of seed germination; IMP:TAIR.::GO:0010161; P:red light signaling pathway; IDA:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
62Q9SVU7    445   BH056_ARATH Putative transcription factor bHL...460.53     35.8     41     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
63Q9CAA9    486   BH049_ARATH Transcription factor bHLH49 OS=Ar...1210.53     35.8     27     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
64O97676    1151   SRBP1_PIG Sterol regulatory element-binding p...870.63     35.8     26     54GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003677; F:DNA binding; ISS:UniProtKB.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.::GO:0008610; P:lipid biosynthetic process; ISS:UniProtKB.::GO:0010867; P:positive regulation of triglyceride biosynthetic process; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
65Q8GY61    335   BH063_ARATH Transcription factor bHLH63 OS=Ar...540.66     35.4     37     54GO:0005634; C:nucleus; IDA:TAIR.
GO:0003677; F:DNA binding; IDA:TAIR.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:TAIR.
GO:0009911; P:positive regulation of flower development; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IDA:TAIR.
66Q60416    1133   SRBP1_CRIGR Sterol regulatory element-binding...1210.68     35.8     25     50GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; ISS:UniProtKB.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.::GO:0008610; P:lipid biosynthetic process; ISS:UniProtKB.::GO:0010867; P:positive regulation of triglyceride biosynthetic process; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
67O23090    423   BH014_ARATH Transcription factor bHLH14 OS=Ar...470.73     35.4     40     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
68P36956    1147   SRBP1_HUMAN Sterol regulatory element-binding...870.76     35.4     26     53GO:0005783; C:endoplasmic reticulum; IDA:UniProtKB.::GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005635; C:nuclear envelope; TAS:ProtInc.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:HGNC.::GO:0032810; F:sterol response element binding; IDA:HGNC.
GO:0009267; P:cellular response to starvation; ISS:HGNC.::GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.::GO:0008610; P:lipid biosynthetic process; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0010867; P:positive regulation of triglyceride biosynthetic process; ISS:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
69Q91YA9    626   BMAL1_NANGA Aryl hydrocarbon receptor nuclear...560.8     35.4     29     63GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005667; C:transcription factor complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
70Q9XEF0    254   BH051_ARATH Transcription factor bHLH51 OS=Ar...480.8     34.7     40     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
71A0MLS5    626   BMAL1_HORSE Aryl hydrocarbon receptor nuclear...560.81     35.4     29     63GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005667; C:transcription factor complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
72Q9WTL8    632   BMAL1_MOUSE Aryl hydrocarbon receptor nuclear...560.81     35.4     29     63GO:0005829; C:cytosol; TAS:Reactome.::GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0043425; F:bHLH transcription factor binding; IPI:BHF-UCL.::GO:0003677; F:DNA binding; IPI:MGI.::GO:0046982; F:protein heterodimerization activity; IPI:BHF-UCL.::GO:0001077; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription; IC:BHF-UCL.::GO:0001190; F:RNA polymerase II transcription factor binding transcription factor activity involved in positive regulation of transcription; IDA:BHF-UCL.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0007623; P:circadian rhythm; IDA:MGI.::GO:0000060; P:protein import into nucleus, translocation; IDA:MGI.::GO:0042176; P:regulation of protein catabolic process; IDA:MGI.
73O00327    626   BMAL1_HUMAN Aryl hydrocarbon receptor nuclear...560.83     35.4     29     63GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005667; C:transcription factor complex; IPI:MGI.
GO:0017162; F:aryl hydrocarbon receptor binding; IPI:BHF-UCL.::GO:0003677; F:DNA binding; IGI:MGI.::GO:0051879; F:Hsp90 protein binding; IDA:BHF-UCL.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0000982; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity; ISS:BHF-UCL.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0007623; P:circadian rhythm; TAS:ProtInc.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:BHF-UCL.
74Q6YGZ5    633   BMAL1_TYTAL Aryl hydrocarbon receptor nuclear...560.83     35.4     29     63GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005667; C:transcription factor complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
75Q5R4T2    625   BMAL1_PONAB Aryl hydrocarbon receptor nuclear...560.85     35.4     29     63GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005667; C:transcription factor complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0048511; P:rhythmic process; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
76Q9EPW1    626   BMAL1_RAT Aryl hydrocarbon receptor nuclear t...560.86     35.4     29     63GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005667; C:transcription factor complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0007623; P:circadian rhythm; IEP:RGD.::GO:0042752; P:regulation of circadian rhythm; NAS:RGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
77O88529    626   BMAL1_MESAU Aryl hydrocarbon receptor nuclear...560.86     35.4     29     63GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005667; C:transcription factor complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0004871; F:signal transducer activity; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
78Q9FJL4    498   BH078_ARATH Transcription factor bHLH78 OS=Ar...540.88     35     37     54GO:0005634; C:nucleus; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
79Q9I8T7    633   BMAL1_CHICK Aryl hydrocarbon receptor nuclear...560.9     35     29     63GO:0005737; C:cytoplasm; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004871; F:signal transducer activity; IEA:InterPro.
80Q5EA15    412   BHE40_BOVIN Class E basic helix-loop-helix pr...1160.92     35     26     46
81O35780    411   BHE40_RAT Class E basic helix-loop-helix prot...1160.94     35     26     46
GO:0007399; P:nervous system development; NAS:RGD.::GO:0048168; P:regulation of neuronal synaptic plasticity; IEP:RGD.
82P13526    610   ARLC_MAIZE Anthocyanin regulatory Lc protein ...460.95     35     41     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
83O35185    411   BHE40_MOUSE Class E basic helix-loop-helix pr...1160.96     35     26     46GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0070888; F:E-box binding; IDA:BHF-UCL.::GO:0043426; F:MRF binding; IDA:BHF-UCL.::GO:0046982; F:protein heterodimerization activity; IDA:BHF-UCL.::GO:0001102; F:RNA polymerase II activating transcription factor binding; IDA:BHF-UCL.::GO:0001078; F:RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription; IDA:BHF-UCL.::GO:0003705; F:RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity; IDA:BHF-UCL.
GO:0032922; P:circadian regulation of gene expression; IMP:BHF-UCL.::GO:0043153; P:entrainment of circadian clock by photoperiod; IMP:BHF-UCL.
84Q9C670    390   BH076_ARATH Transcription factor bHLH76 OS=Ar...1081.1     34.7     25     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0009911; P:positive regulation of flower development; IGI:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
85P13027    612   ARRS_MAIZE Anthocyanin regulatory R-S protein...461.2     35     41     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
86B3F209    412   BHE40_SHEEP Class E basic helix-loop-helix pr...1161.2     34.7     26     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
87Q9M128    315   BH057_ARATH Transcription factor bHLH57 OS=Ar...591.3     34.3     34     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
88Q9SVU6    413   BH023_ARATH Transcription factor bHLH23 OS=Ar...461.4     34.3     37     63GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
89Q9D030    160   TWST2_MOUSE Twist-related protein 2 OS=Mus mu...1311.5     33.5     30     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005667; C:transcription factor complex; IPI:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0019904; F:protein domain specific binding; IPI:MGI.::GO:0001076; F:RNA polymerase II transcription factor binding transcription factor activity; IDA:MGI.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:MGI.
GO:0061303; P:cornea development in camera-type eye; IMP:MGI.::GO:0048701; P:embryonic cranial skeleton morphogenesis; IGI:MGI.::GO:0060325; P:face morphogenesis; IMP:MGI.::GO:0008285; P:negative regulation of cell proliferation; IMP:MGI.::GO:0043392; P:negative regulation of DNA binding; IDA:MGI.::GO:0045638; P:negative regulation of myeloid cell differentiation; IMP:MGI.::GO:0045668; P:negative regulation of osteoblast differentiation; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0032720; P:negative regulation of tumor necrosis factor production; IMP:MGI.::GO:0001649; P:osteoblast differentiation; IMP:MGI.::GO:0010838; P:positive regulation of keratinocyte proliferation; IMP:MGI.
90Q2VPD4    579   BMAL2_MOUSE Aryl hydrocarbon receptor nuclear...1051.5     34.3     23     49GO:0005737; C:cytoplasm; IEA:InterPro.::GO:0005667; C:transcription factor complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004871; F:signal transducer activity; IEA:InterPro.
91Q7XHI7    307   BH127_ARATH Transcription factor bHLH127 OS=A...451.7     33.9     40     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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