Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YJR052W
Length:
565
Number of sequences:
5887
Description:
YJR052W RAD7 SGDID:S000003813, Chr X from 532062-533759, Genome Release 64-1-1, Verified ORF, "Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad16p) during nucleotide excision repair; subunit of Nucleotide Excision Repair Factor 4 (NEF4) and the Elongin-Cullin-Socs (ECS) ligase complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31D4ABB4    300   FXL15_RAT F-box/LRR-repeat protein 15 OS=Ratt...732.7     34.3     29     51GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0019005; C:SCF ubiquitin ligase complex; ISS:UniProtKB.
GO:0030282; P:bone mineralization; IMP:UniProtKB.::GO:0009953; P:dorsal/ventral pattern formation; ISS:UniProtKB.::GO:0000086; P:G2/M transition of mitotic cell cycle; ISS:UniProtKB.::GO:0030513; P:positive regulation of BMP signaling pathway; ISS:UniProtKB.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
32Q8LB33    353   FB330_ARATH F-box protein At3g58530 OS=Arabid...2760.17     38.1     25     40GO:0005829; C:cytosol; IDA:TAIR.
33Q8CDU4    790   FXL13_MOUSE F-box/LRR-repeat protein 13 OS=Mu...754.5     33.9     27     53
34A2RT62    479   FXL16_MOUSE F-box/LRR-repeat protein 16 OS=Mu...1330.59     36.6     29     44
35Q6NW95    296   FXL15_DANRE F-box/LRR-repeat protein 15 OS=Da...1181.7     35     30     46GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0019005; C:SCF ubiquitin ligase complex; ISS:UniProtKB.
GO:0030282; P:bone mineralization; ISS:UniProtKB.::GO:0009953; P:dorsal/ventral pattern formation; IMP:UniProtKB.::GO:0000086; P:G2/M transition of mitotic cell cycle; ISS:UniProtKB.::GO:0030513; P:positive regulation of BMP signaling pathway; ISS:UniProtKB.::GO:0016567; P:protein ubiquitination; ISS:UniProtKB.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
36O74783    463   POF2_SCHPO SCF E3 ubiquitin ligase complex F-...1060.21     38.1     30     45GO:0005739; C:mitochondrion; IDA:PomBase.
GO:0005515; F:protein binding; IPI:UniProtKB.
37Q9URX3    338   1A1D_SCHPO Probable 1-aminocyclopropane-1-car...930.31     37.4     33     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0008660; F:1-aminocyclopropane-1-carboxylate deaminase activity; IEA:EC.::GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
GO:0009310; P:amine catabolic process; IEA:InterPro.::GO:0019541; P:propionate metabolic process; IC:PomBase.
38Q9UF56    701   FXL17_HUMAN F-box/LRR-repeat protein 17 OS=Ho...3100.35     37.4     22     43
39Q9SMY8    990   FBL15_ARATH F-box/LRR-repeat protein 15 OS=Ar...3380.35     37.7     24     41
GO:0010252; P:auxin homeostasis; IMP:TAIR.::GO:0048645; P:organ formation; IMP:TAIR.
40Q9QZN1    701   FXL17_MOUSE F-box/LRR-repeat protein 17 OS=Mu...3220.42     37.4     22     43
41Q8N461    479   FXL16_HUMAN F-box/LRR-repeat protein 16 OS=Ho...1262.1     34.7     23     40
42Q7SZ73    292   FXL15_XENLA F-box/LRR-repeat protein 15 OS=Xe...630.91     35.8     35     54GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0019005; C:SCF ubiquitin ligase complex; ISS:UniProtKB.
GO:0030282; P:bone mineralization; ISS:UniProtKB.::GO:0009953; P:dorsal/ventral pattern formation; ISS:UniProtKB.::GO:0000086; P:G2/M transition of mitotic cell cycle; ISS:UniProtKB.::GO:0030513; P:positive regulation of BMP signaling pathway; ISS:UniProtKB.::GO:0016567; P:protein ubiquitination; ISS:UniProtKB.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
43Q9ZWC6    607   ATB_ARATH F-box protein At-B OS=Arabidopsis t...3161.1     35.8     22     40
44Q5XGC0    292   FXL15_XENTR F-box/LRR-repeat protein 15 OS=Xe...631.6     35     35     54GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0019005; C:SCF ubiquitin ligase complex; ISS:UniProtKB.
GO:0030282; P:bone mineralization; ISS:UniProtKB.::GO:0009953; P:dorsal/ventral pattern formation; ISS:UniProtKB.::GO:0000086; P:G2/M transition of mitotic cell cycle; ISS:UniProtKB.::GO:0030513; P:positive regulation of BMP signaling pathway; ISS:UniProtKB.::GO:0016567; P:protein ubiquitination; ISS:UniProtKB.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
45Q8WV35    223   LRC29_HUMAN Leucine-rich repeat-containing pr...732     34.3     30     47
46E6ZHJ8    292   FXL15_DICLA F-box/LRR-repeat protein 15 OS=Di...1254.1     33.5     25     49GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0019005; C:SCF ubiquitin ligase complex; ISS:UniProtKB.
GO:0030282; P:bone mineralization; ISS:UniProtKB.::GO:0009953; P:dorsal/ventral pattern formation; ISS:UniProtKB.::GO:0000086; P:G2/M transition of mitotic cell cycle; ISS:UniProtKB.::GO:0030513; P:positive regulation of BMP signaling pathway; ISS:UniProtKB.::GO:0016567; P:protein ubiquitination; ISS:UniProtKB.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
47Q6C725    717   AMN1_YARLI Antagonist of mitotic exit network...662.6     34.7     30     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
48Q10303    511   ALP21_SCHPO Cell polarity protein alp21 OS=Sc...364.1     33.9     44     67GO:0005829; C:cytosol; IDA:PomBase.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0043014; F:alpha-tubulin binding; IPI:PomBase.
GO:0007017; P:microtubule-based process; NAS:PomBase.::GO:0007023; P:post-chaperonin tubulin folding pathway; ISS:PomBase.
49Q5R8X9    258   AMN1_PONAB Protein AMN1 homolog OS=Pongo abel...2224.3     33.5     21     39
50Q9LPL4    360   SKP2A_ARATH F-box protein SKP2A OS=Arabidopsi...2484.3     33.5     27     40GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.
GO:0009734; P:auxin mediated signaling pathway; IEA:UniProtKB-KW.::GO:0010386; P:lateral root primordium development; IMP:UniProtKB.::GO:0051781; P:positive regulation of cell division; IMP:TAIR.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:UniProtKB.
51Q9S9V8    246   FBL9_ARATH Putative F-box/LRR-repeat protein ...615.4     33.1     28     51
52P11369    1281   POL2_MOUSE Retrovirus-related Pol polyprotein...1095.6     33.9     25     49
GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.
53O22161    930   ADLO1_ARATH Protein ARABIDILLO 1 OS=Arabidops...996.5     33.5     29     46GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0048527; P:lateral root development; IMP:TAIR.
54Q9SRR1    395   FBL12_ARATH F-box/LRR-repeat protein 12 OS=Ar...1299.6     32.7     31     43
records
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