Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YJR050W
Length:
235
Number of sequences:
5887
Description:
YJR050W ISY1 SGDID:S000003811, Chr X from 528697-529404, Genome Release 64-1-1, Verified ORF, "Member of NineTeen Complex (NTC) that contains Prp19p and stabilizes U6 snRNA in catalytic forms of spliceosome containing U2, U5, and U6 snRNAs, interacts with Prp16p to modulate splicing fidelity; isy1 syf2 cells have defective spindles"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P21374    235   ISY1_YEAST Pre-mRNA-splicing factor ISY1 OS=S...2354e-175     488     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0071014; C:post-mRNA release spliceosomal complex; IDA:SGD.::GO:0071020; C:post-spliceosomal complex; IDA:SGD.::GO:0000974; C:Prp19 complex; IDA:SGD.::GO:0071006; C:U2-type catalytic step 1 spliceosome; IDA:SGD.::GO:0071007; C:U2-type catalytic step 2 spliceosome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000350; P:generation of catalytic spliceosome for second transesterification step; IMP:SGD.::GO:0000389; P:nuclear mRNA 3'-splice site recognition; IMP:SGD.
2Q6CJQ3    237   ISY1_KLULA Pre-mRNA-splicing factor ISY1 OS=1...2454e-54     180     43     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
3Q753F1    240   ISY1_ASHGO Pre-mRNA-splicing factor ISY1 OS=Y...2554e-43     151     39     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
4Q6C9I7    220   ISY1_YARLI Pre-mRNA-splicing factor ISY1 OS=l...2323e-31     120     36     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
5Q5B423    256   ISY1_EMENI Pre-mRNA-splicing factor isy1 OS=1...1882e-25     105     38     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
6Q6FR30    203   ISY1_CANGA Pre-mRNA-splicing factor ISY1 OS=N...2393e-25     103     33     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
7Q7SHY8    239   ISY1_NEUCR Pre-mRNA-splicing factor isy-1 OS=...1832e-24     102     36     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
8Q51LS1    246   ISY1_MAGO7 Pre-mRNA-splicing factor ISY1 OS=b...2524e-24     101     31     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
9Q6BU51    298   ISY1_DEBHA Pre-mRNA-splicing factor ISY1 OS=0...1521e-23     100     41     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
10Q59R35    266   ISY1_CANAL Pre-mRNA-splicing factor ISY1 OS=C...1533e-22     96.3     37     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0035690; P:cellular response to drug; IMP:CGD.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
11P0CO36    348   ISY1_CRYNJ Pre-mRNA-splicing factor ISY1 OS=A...1513e-20     91.3     36     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
12P0CO37    348   ISY1_CRYNB Pre-mRNA-splicing factor ISY1 OS=(...1513e-20     91.3     36     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
13Q4PEZ0    351   ISY1_USTMA Pre-mRNA-splicing factor ISY1 OS=U...1557e-20     90.1     40     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
14Q4WUJ6    243   ISY1_ASPFU Pre-mRNA-splicing factor isy1 OS=A...1402e-19     87.8     38     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
15Q69ZQ2    285   ISY1_MOUSE Pre-mRNA-splicing factor ISY1 homo...1470.00000000000007     72.4     33     52GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
16Q6AYB3    284   ISY1_RAT Pre-mRNA-splicing factor ISY1 homolo...1470.00000000000007     72.4     33     52GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
17O74370    217   ISY1_SCHPO Pre-mRNA-splicing factor cwf12 OS=...2230.00000000000007     71.2     29     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0005681; C:spliceosomal complex; ISS:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
18Q9ULR0    285   ISY1_HUMAN Pre-mRNA-splicing factor ISY1 homo...1470.00000000000007     72     33     52GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.
19Q54N41    299   ISY1_DICDI Pre-mRNA-splicing factor ISY1 homo...1700.00000002     57.4     29     48GO:0005681; C:spliceosomal complex; ISS:dictyBase.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:dictyBase.
20Q9CBY7    886   SYV_MYCLE Valine--tRNA ligase OS=Mycobacteriu...763.7     32.3     32     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004832; F:valine-tRNA ligase activity; IEA:EC.
GO:0006438; P:valyl-tRNA aminoacylation; IEA:InterPro.
21A8MLW9    290   Y574_ALKOO UPF0042 nucleotide-binding protein...623.8     32     34     56
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
22Q9MSR8    509   MATK_AMEAR Maturase K OS=argotaenia). GN=matK...934.9     32     29     39GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
23Q9MVV7    495   MATK_TORCL Maturase K OS=Torreya californica ...935.2     32     29     40GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
24Q9K9W8    270   FDHD_BACHD Protein FdhD homolog OS=9153 / C-1...1009.2     30.8     27     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0009326; C:formate dehydrogenase complex; IEA:InterPro.
GO:0008863; F:formate dehydrogenase (NAD+) activity; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 24 1 - 24
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::