Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YJR035W
Length:
1085
Number of sequences:
5887
Description:
YJR035W RAD26 SGDID:S000003796, Chr X from 497355-500612, Genome Release 64-1-1, Verified ORF, "Protein involved in transcription-coupled nucleotide excision repair of UV-induced DNA lesions; recruitment to DNA lesions is dependent on an elongating RNA polymerase II; homolog of human CSB protein"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
331P51900    183   HGXR_TRIFO Hypoxanthine-guanine-xanthine phos...310.99     35.8     52     74GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004422; F:hypoxanthine phosphoribosyltransferase activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
GO:0006166; P:purine ribonucleoside salvage; IEA:UniProtKB-KW.
332Q10HL3    1410   DCL2A_ORYSJ Endoribonuclease Dicer homolog 2a...1401.1     37     24     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:InterPro.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.
333Q8EJ93    968   RAPA_SHEON RNA polymerase-associated protein ...1301.1     37     28     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
334A8FQW4    968   RAPA_SHESH RNA polymerase-associated protein ...501.2     37     40     56
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
335P59597    962   SUUR_DROER Protein suppressor of underreplica...611.3     37     28     56GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
336B7VIC2    969   RAPA_VIBSL RNA polymerase-associated protein ...571.3     37     33     56
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
337A4KX71    944   HELI1_HVAVE Putative ATP-dependent RNA helica...1321.3     37     29     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
338Q6LV34    972   RAPA_PHOPR RNA polymerase-associated protein ...641.4     36.6     31     55
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
339A0KGL5    955   RAPA_AERHH RNA polymerase-associated protein ...501.6     36.6     42     56
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
340A4SR75    955   RAPA_AERS4 RNA polymerase-associated protein ...501.7     36.6     42     56
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
341Q9VTE2    962   SUUR_DROME Protein suppressor of underreplica...611.9     36.2     28     52GO:0005721; C:centromeric heterochromatin; IDA:UniProtKB.::GO:0005725; C:intercalary heterochromatin; IDA:UniProtKB.::GO:0005724; C:nuclear telomeric heterochromatin; IDA:UniProtKB.::GO:0005700; C:polytene chromosome; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0003677; F:DNA binding; IEA:InterPro.
GO:0042023; P:DNA endoreduplication; IMP:FlyBase.::GO:0031507; P:heterochromatin assembly; IMP:FlyBase.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0008156; P:negative regulation of DNA replication; TAS:FlyBase.::GO:0032877; P:positive regulation of DNA endoreduplication; IMP:FlyBase.
342A6R918    676   SPB4_AJECN ATP-dependent rRNA helicase SPB4 O...1032     36.2     22     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
343Q7SCC1    1540   DCL2_NEUCR Dicer-like protein 2 OS=1257 / FGS...1492.3     36.2     26     44GO:0005622; C:intracellular; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004525; F:ribonuclease III activity; IEA:InterPro.
GO:0050688; P:regulation of defense response to virus; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.
344Q2PIU8    1166   TOF1_ASPOR Topoisomerase 1-associated factor ...1914.9     35     21     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0008156; P:negative regulation of DNA replication; IEA:UniProtKB-KW.
345A6TWK5    464   SYC_ALKMQ Cysteine--tRNA ligase OS=Alkaliphil...546.9     34.3     37     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004817; F:cysteine-tRNA ligase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006423; P:cysteinyl-tRNA aminoacylation; IEA:InterPro.
346P38550    1392   RPOC2_TOBAC DNA-directed RNA polymerase subun...537.5     34.3     38     53GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
347Q3C1G9    1392   RPOC2_NICSY DNA-directed RNA polymerase subun...537.5     34.3     38     53GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
348Q33C48    1392   RPOC2_NICTO DNA-directed RNA polymerase subun...538.1     34.3     38     51GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
349Q3V544    1386   RPOC2_ACOCL DNA-directed RNA polymerase subun...528.3     34.3     40     58GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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