Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YJL203W
Length:
280
Number of sequences:
5887
Description:
YJL203W PRP21 SGDID:S000003739, Chr X from 53341-54183, Genome Release 64-1-1, Verified ORF, "Subunit of the SF3a splicing factor complex, required for spliceosome assembly"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P32524    280   PRP21_YEAST Pre-mRNA-splicing factor PRP21 OS...2800     575     100     100GO:0005686; C:U2 snRNP; TAS:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD.
GO:0003723; F:RNA binding; IDA:SGD.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:SGD.
2O13900    481   SA114_SCHPO Pre-mRNA-splicing factor sap114 O...2250.0000000002     64.7     25     48GO:0005681; C:spliceosomal complex; IC:PomBase.::GO:0005686; C:U2 snRNP; ISS:PomBase.
GO:0003723; F:RNA binding; ISS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
3A2VDN6    793   SF3A1_BOVIN Splicing factor 3A subunit 1 OS=B...2370.0000000005     63.2     23     49GO:0005684; C:U2-type spliceosomal complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.
4Q8K4Z5    791   SF3A1_MOUSE Splicing factor 3A subunit 1 OS=M...2360.0000000008     62.8     22     49GO:0005684; C:U2-type spliceosomal complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.
5Q15459    793   SF3A1_HUMAN Splicing factor 3A subunit 1 OS=H...2350.0000000009     62.8     22     47GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005684; C:U2-type spliceosomal complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IDA:UniProtKB.
GO:0000389; P:nuclear mRNA 3'-splice site recognition; TAS:HGNC.
6Q8RXF1    785   SF3A1_ARATH Probable splicing factor 3A subun...2440.0000001     56.2     22     45GO:0005684; C:U2-type spliceosomal complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.
7Q9HJT4    1026   SYI_THEAC Isoleucine--tRNA ligase OS=NBRC 151...741.1     34.7     31     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004822; F:isoleucine-tRNA ligase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006428; P:isoleucyl-tRNA aminoacylation; IEA:InterPro.
8Q86A14    760   SF3A1_DICDI Probable splicing factor 3A subun...1451.4     34.3     23     50GO:0005684; C:U2-type spliceosomal complex; ISS:UniProtKB.
GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0000389; P:nuclear mRNA 3'-splice site recognition; ISS:dictyBase.
9P12297    963   SUWA_DROME Protein suppressor of white aprico...686.3     32     31     50GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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