Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YJL189W
Length:
51
Number of sequences:
5887
Description:
YJL189W RPL39 SGDID:S000003725, Chr X from 75933-75938,76325-76474, Genome Release 64-1-1, Verified ORF, "Protein component of the large (60S) ribosomal subunit, has similarity to rat L39 ribosomal protein; required for ribosome biogenesis; loss of both Rpl31p and Rpl39p confers lethality; also exhibits genetic interactions with SIS1 and PAB1"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P04650    51   RL39_YEAST 60S ribosomal protein L39 OS=Sacch...516e-28     99.8     100     100GO:0022625; C:cytosolic large ribosomal subunit; TAS:SGD.
GO:0003735; F:structural constituent of ribosome; TAS:SGD.
GO:0002181; P:cytoplasmic translation; TAS:SGD.
2Q758D8    51   RL39_ASHGO 60S ribosomal protein L39 OS=Y-105...512e-23     88.6     84     94GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
3Q6BHV8    51   RL39_DEBHA 60S ribosomal protein L39 OS=0083 ...513e-23     87.8     82     94GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
4Q96W55    51   RL39_CANAX 60S ribosomal protein L39 OS=Candi...512e-22     85.5     80     92GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
5P48536    51   RL39_KLUMA 60S ribosomal protein L39 OS=Kluyv...491e-21     84     84     94GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
6Q6CW22    51   RL39_KLULA 60S ribosomal protein L39 OS=1267 ...515e-21     82     78     90GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
7P05767    51   RL39_SCHPO 60S ribosomal protein L39 OS=Schiz...511e-20     80.9     73     86GO:0022625; C:cytosolic large ribosomal subunit; ISS:PomBase.
GO:0003735; F:structural constituent of ribosome; ISS:PomBase.
GO:0002181; P:cytoplasmic translation; NAS:PomBase.
8Q962S4    51   RL39_SPOFR 60S ribosomal protein L39 OS=Spodo...516e-19     76.6     69     88GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
9Q6F482    51   RL39_PLUXY 60S ribosomal protein L39 OS=Plute...516e-19     76.6     69     88GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
10P51425    51   RL39_MAIZE 60S ribosomal protein L39 OS=Zea m...512e-18     75.9     67     86
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
11P51426    51   RL392_ORYSJ 60S ribosomal protein L39-2 OS=Or...512e-18     75.9     67     86
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
12Q6KAJ8    51   RL391_ORYSJ 60S ribosomal protein L39-1 OS=Or...512e-18     75.9     67     86
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
13P51424    51   RL391_ARATH 60S ribosomal protein L39-1 OS=Ar...512e-18     75.5     67     82GO:0022625; C:cytosolic large ribosomal subunit; IDA:TAIR.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
14Q90YS9    51   RL39_ICTPU 60S ribosomal protein L39 OS=Ictal...514e-18     74.7     65     88GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
15Q5SMI4    51   RL393_ORYSJ 60S ribosomal protein L39-3 OS=Or...517e-18     73.9     65     86
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
16Q59GN2    51   R39L5_HUMAN Putative 60S ribosomal protein L3...511e-17     73.6     61     88GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
17P62893    51   RL39_RAT 60S ribosomal protein L39 OS=Rattus ...511e-17     73.6     63     88
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
18P62892    51   RL39_MOUSE 60S ribosomal protein L39 OS=Mus m...511e-17     73.6     63     88GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
19P62891    51   RL39_HUMAN 60S ribosomal protein L39 OS=Homo ...511e-17     73.6     63     88GO:0022625; C:cytosolic large ribosomal subunit; IDA:UniProtKB.
GO:0003723; F:RNA binding; TAS:UniProtKB.::GO:0003735; F:structural constituent of ribosome; NAS:UniProtKB.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; TAS:Reactome.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.::GO:0006414; P:translational elongation; TAS:Reactome.::GO:0006413; P:translational initiation; TAS:Reactome.::GO:0006415; P:translational termination; TAS:Reactome.::GO:0019083; P:viral transcription; TAS:Reactome.
20Q3T051    51   RL39_BOVIN 60S ribosomal protein L39 OS=Bos t...511e-17     73.6     63     88
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
21Q98TF5    51   RL39_CHICK 60S ribosomal protein L39 OS=Gallu...513e-17     72.4     61     88GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
22Q8L8W6    51   RL392_ARATH 60S ribosomal protein L39-2 OS=Ar...514e-17     72     65     80GO:0022625; C:cytosolic large ribosomal subunit; IDA:TAIR.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
23P52814    51   RL39_CAEEL 60S ribosomal protein L39 OS=Caeno...507e-16     68.9     64     90GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040018; P:positive regulation of multicellular organism growth; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0006412; P:translation; IEA:InterPro.
24O16130    51   RL39_DROME 60S ribosomal protein L39 OS=Droso...510.000000000000001     68.6     76     88GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0000022; P:mitotic spindle elongation; IMP:FlyBase.::GO:0006412; P:translation; IEA:InterPro.
25Q96EH5    51   RL39L_HUMAN 60S ribosomal protein L39-like OS...510.000000000000008     66.2     55     84GO:0022625; C:cytosolic large ribosomal subunit; NAS:UniProtKB.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0007283; P:spermatogenesis; IEP:UniProtKB.::GO:0006412; P:translation; IEA:InterPro.
26P0DJ61    52   RL39_TETTS 60S ribosomal protein L39 OS=Tetra...510.000000000001     60.5     53     73GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
27A8MAL5    52   RL39_CALMQ 50S ribosomal protein L39e OS=/ IC...510.00000003     48.9     43     61GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
28A4YH79    51   RL39_METS5 50S ribosomal protein L39e OS=Meta...510.0000001     47.4     41     65GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
29P13005    51   RL39_SULAC 50S ribosomal protein L39e OS=NBRC...510.0000002     47     41     63GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
30Q971I1    51   RL39_SULTO 50S ribosomal protein L39e OS=Sulf...510.0000003     46.2     39     61GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
31P59472    51   RL39_AERPE 50S ribosomal protein L39e OS=1001...510.0000003     46.2     43     67GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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