Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YJL176C
Length:
825
Number of sequences:
5887
Description:
YJL176C SWI3 SGDID:S000003712, Chr X from 94530-92053, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the SWI/SNF chromatin remodeling complex, which regulates transcription by remodeling chromosomes; required for transcription of many genes, including ADH1, ADH2, GAL1, HO, INO1 and SUC2"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31O13493    324   MYB1_NEUCR Myb-like DNA-binding protein myb-1...420.42     37.4     36     67GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
32Q6C8F5    719   CEF1_YARLI Pre-mRNA-splicing factor CEF1 OS=l...800.44     37.7     30     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
33Q8BP86    1333   SNPC4_MOUSE snRNA-activating protein complex ...420.54     37.7     36     67GO:0019185; C:snRNA-activating protein complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; ISS:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0042795; P:snRNA transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0042796; P:snRNA transcription from RNA polymerase III promoter; ISS:UniProtKB.
34Q6UDJ5    3195   DEN_PSHV1 Deneddylase UL36 OS=(PsHV-1) (Pache...2250.63     37.7     20     38GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019033; C:viral tegument; IEA:UniProtKB-SubCell.
GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.::GO:0008242; F:omega peptidase activity; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
35Q6CMB8    1005   EAF1_KLULA Chromatin modification-related pro...670.69     37.4     30     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
36Q5SXM2    1469   SNPC4_HUMAN snRNA-activating protein complex ...421.3     36.6     36     64GO:0019185; C:snRNA-activating protein complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IDA:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.
GO:0042795; P:snRNA transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0042796; P:snRNA transcription from RNA polymerase III promoter; IDA:UniProtKB.
37Q3T067    429   SCPDL_BOVIN Saccharopine dehydrogenase-like o...591.3     36.2     27     51
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
38Q6R0H0    287   ASG4_ARATH Transcription factor ASG4 OS=Arabi...481.4     35.8     33     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0009651; P:response to salt stress; IEP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
39Q75LL6    567   TADA2_ORYSJ Transcriptional adapter ADA2 OS=O...411.5     35.8     39     68GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
40Q6P0N0    1132   M18BP_HUMAN Mis18-binding protein 1 OS=Homo s...502.6     35.4     32     58GO:0000775; C:chromosome, centromeric region; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0034080; P:CenH3-containing nucleosome assembly at centromere; TAS:Reactome.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
41Q54IF9    423   MYBG_DICDI Myb-like protein G OS=Dictyosteliu...432.8     35     35     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; ISS:dictyBase.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
42Q8HYW0    697   FA13A_BOVIN Protein FAM13A OS=Bos taurus (Bov...983.1     35     30     51
43Q6CPC2    1217   BUD4_KLULA Bud site selection protein 4 OS=12...644.2     34.7     34     58GO:0005935; C:cellular bud neck; IEA:UniProtKB-SubCell.
GO:0005543; F:phospholipid binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.
44Q6H1V1    669   BEST3_MOUSE Bestrophin-3 OS=Mus musculus (Mou...1764.3     34.7     27     39GO:0034707; C:chloride channel complex; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005254; F:chloride channel activity; IDA:MGI.
GO:0043271; P:negative regulation of ion transport; IDA:MGI.
45Q869R9    734   MYBJ_DICDI Myb-like protein J OS=Dictyosteliu...554.4     34.7     33     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; ISS:dictyBase.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
46O74465    1015   HRR1_SCHPO Helicase required for RNAi-mediate...1344.9     34.7     29     43GO:0016585; C:chromatin remodeling complex; NAS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0031380; C:nuclear RNA-directed RNA polymerase complex; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; TAS:PomBase.::GO:0005515; F:protein binding; IPI:PomBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; NAS:PomBase.::GO:0030702; P:chromatin silencing at centromere; IMP:PomBase.::GO:0031048; P:chromatin silencing by small RNA; IMP:PomBase.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.
47D3YZP9    469   CCDC6_MOUSE Coiled-coil domain-containing pro...505.4     34.3     40     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0017124; F:SH3 domain binding; IEA:UniProtKB-KW.
48Q16204    474   CCDC6_HUMAN Coiled-coil domain-containing pro...505.5     34.3     40     62GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0017124; F:SH3 domain binding; IEA:UniProtKB-KW.::GO:0005200; F:structural constituent of cytoskeleton; TAS:ProtInc.
49O94988    1023   FA13A_HUMAN Protein FAM13A OS=Homo sapiens (H...1037.7     33.9     31     50GO:0005829; C:cytosol; TAS:Reactome.
GO:0005096; F:GTPase activator activity; IEA:UniProtKB-KW.
GO:0051056; P:regulation of small GTPase mediated signal transduction; TAS:Reactome.::GO:0007264; P:small GTPase mediated signal transduction; TAS:Reactome.
50Q8BGI4    693   FA13A_MOUSE Protein FAM13A OS=Mus musculus (M...1039.9     33.5     31     50
records
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