Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YJL090C
Length:
764
Number of sequences:
5887
Description:
YJL090C DPB11 SGDID:S000003626, Chr X from 265051-262757, Genome Release 64-1-1, reverse complement, Verified ORF, "Replication initiation protein that loads DNA pol epsilon onto pre-replication complexes at origins; checkpoint sensor recruited to stalled replication forks by the checkpoint clamp complex where it activates Mec1p; ortholog of human TopBP1"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P47027    764   DPB11_YEAST DNA replication regulator DPB11 O...7640     1565     100     100GO:0031261; C:DNA replication preinitiation complex; IMP:SGD.::GO:0005657; C:replication fork; IDA:SGD.
GO:0005515; F:protein binding; IPI:SGD.::GO:0030295; F:protein kinase activator activity; IDA:SGD.
GO:0000076; P:DNA replication checkpoint; IMP:SGD.::GO:0006270; P:DNA-dependent DNA replication initiation; TAS:SGD.::GO:0000727; P:double-strand break repair via break-induced replication; IMP:SGD.::GO:0006273; P:lagging strand elongation; TAS:SGD.::GO:0006272; P:leading strand elongation; TAS:SGD.::GO:0007533; P:mating type switching; IMP:SGD.::GO:0006298; P:mismatch repair; NAS:SGD.::GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:SGD.::GO:0006289; P:nucleotide-excision repair; TAS:SGD.
2P32372    648   RAD4_SCHPO S-M checkpoint control protein rad...5112e-22     105     26     42GO:0005829; C:cytosol; IDA:PomBase.::GO:0031261; C:DNA replication preinitiation complex; ISS:PomBase.::GO:0043596; C:nuclear replication fork; ISS:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000077; P:DNA damage checkpoint; IMP:PomBase.::GO:0071163; P:DNA replication preinitiation complex assembly; IMP:PomBase.::GO:0006270; P:DNA-dependent DNA replication initiation; ISS:PomBase.::GO:0033314; P:mitotic cell cycle DNA replication checkpoint; IMP:PomBase.
3Q9LL84    1219   DNLI4_ARATH DNA ligase 4 OS=Arabidopsis thali...380.25     38.5     42     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0009506; C:plasmodesma; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003910; F:DNA ligase (ATP) activity; IDA:TAIR.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0051103; P:DNA ligation involved in DNA repair; IEA:InterPro.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006302; P:double-strand break repair; IMP:TAIR.::GO:0010165; P:response to X-ray; IMP:TAIR.
4A9BJX5    668   DNLJ_PETMO DNA ligase OS=Petrotoga mobilis (s...470.74     37     30     64GO:0005622; C:intracellular; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003911; F:DNA ligase (NAD+) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
5Q10337    878   BRC1_SCHPO BRCT-containing protein 1 OS=Schiz...910.77     37     26     49GO:0005634; C:nucleus; IDA:PomBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051276; P:chromosome organization; IGI:PomBase.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006301; P:postreplication repair; IMP:PomBase.::GO:0000018; P:regulation of DNA recombination; IMP:PomBase.
6B4F2T5    936   SYI_PROMH Isoleucine--tRNA ligase OS=Proteus ...762.2     35.4     29     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004822; F:isoleucine-tRNA ligase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006428; P:isoleucyl-tRNA aminoacylation; IEA:InterPro.
7A7HJG6    681   DNLJ_FERNB DNA ligase OS=Fervidobacterium nod...593.1     35     34     54GO:0005622; C:intracellular; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003911; F:DNA ligase (NAD+) activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
8Q6CME1    1321   RTC1_KLULA Restriction of telomere capping pr...903.9     34.7     32     50GO:0005773; C:vacuole; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
records
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