Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YJL087C
Length:
827
Number of sequences:
5887
Description:
YJL087C TRL1 SGDID:S000003623, Chr X from 272485-270002, Genome Release 64-1-1, reverse complement, Verified ORF, "tRNA ligase, required for tRNA splicing and for both splicing and translation of HAC1 mRNA in the UPR; has phosphodiesterase, polynucleotide kinase, and ligase activities; localized at the inner nuclear envelope and partially to polysomes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P09880    827   TRNL_YEAST tRNA ligase OS=Saccharomyces cerev...8270     1710     100     100GO:0005637; C:nuclear inner membrane; IDA:SGD.
GO:0004113; F:2',3'-cyclic-nucleotide 3'-phosphodiesterase activity; IDA:SGD.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0051730; F:GTP-dependent polyribonucleotide 5'-hydroxyl-kinase activity; IDA:SGD.::GO:0003972; F:RNA ligase (ATP) activity; IDA:SGD.
GO:0032056; P:positive regulation of translation in response to stress; IPI:SGD.::GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IDA:SGD.::GO:0030969; P:UFP-specific transcription factor mRNA processing involved in endoplasmic reticulum unfolded protein response; IMP:SGD.
2P43075    832   TRNL_CANAL tRNA ligase OS=Candida albicans (s...7228e-170     519     42     59
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0016301; F:kinase activity; IEA:UniProtKB-KW.::GO:0003972; F:RNA ligase (ATP) activity; IGI:CGD.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; IGI:CGD.
3Q10313    787   YD61_SCHPO Uncharacterized protein C17G8.01c ...7749e-115     374     34     50GO:0005829; C:cytosol; IDA:PomBase.::GO:0005637; C:nuclear inner membrane; ISS:PomBase.
GO:0004113; F:2',3'-cyclic-nucleotide 3'-phosphodiesterase activity; ISS:PomBase.::GO:0005524; F:ATP binding; IEA:InterPro.::GO:0051730; F:GTP-dependent polyribonucleotide 5'-hydroxyl-kinase activity; ISS:PomBase.::GO:0003972; F:RNA ligase (ATP) activity; ISS:PomBase.
GO:0006388; P:tRNA splicing, via endonucleolytic cleavage and ligation; ISS:PomBase.
4Q6FSZ7    238   AIM37_CANGA Altered inheritance of mitochondr...770.33     37.4     34     56GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
5A6L7P5    576   SYK_BACV8 Lysine--tRNA ligase OS=Bacteroides ...1151.8     35.8     30     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004824; F:lysine-tRNA ligase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006430; P:lysyl-tRNA aminoacylation; IEA:InterPro.
6P24136    358   OPPD_BACSU Oligopeptide transport ATP-binding...751.8     35.4     32     49GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0015197; F:peptide transporter activity; IEA:InterPro.
GO:0030420; P:establishment of competence for transformation; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
7Q1RH18    1039   Y1265_RICBR Uncharacterized protein RBE_1265 ...1232.7     35.4     26     53GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0030255; P:protein secretion by the type IV secretion system; IEA:InterPro.
8Q5L9E5    575   SYK_BACFN Lysine--tRNA ligase OS=Bacteroides ...1153     35     30     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004824; F:lysine-tRNA ligase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006430; P:lysyl-tRNA aminoacylation; IEA:InterPro.
9Q64PM9    575   SYK_BACFR Lysine--tRNA ligase OS=Bacteroides ...1153.1     35     30     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004824; F:lysine-tRNA ligase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006430; P:lysyl-tRNA aminoacylation; IEA:InterPro.
10A2SHH9    617   FTSH_METPP ATP-dependent zinc metalloprotease...457.4     33.9     42     64GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004222; F:metalloendopeptidase activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030163; P:protein catabolic process; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
records
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