Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YJL080C
Length:
1222
Number of sequences:
5887
Description:
YJL080C SCP160 SGDID:S000003616, Chr X from 289226-285558, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential RNA-binding G protein effector of mating response pathway, mainly associated with nuclear envelope and ER, interacts in mRNA-dependent manner with translating ribosomes via multiple KH domains, similar to vertebrate vigilins"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P06105    1222   SC160_YEAST Protein SCP160 OS=Saccharomyces c...12220     2474     100     100GO:0005789; C:endoplasmic reticulum membrane; IDA:SGD.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005844; C:polysome; IDA:SGD.
GO:0001965; F:G-protein alpha-subunit binding; IPI:SGD.::GO:0003723; F:RNA binding; IDA:SGD.
GO:0030466; P:chromatin silencing at silent mating-type cassette; IMP:SGD.::GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0007059; P:chromosome segregation; IMP:SGD.::GO:0008298; P:intracellular mRNA localization; IPI:SGD.::GO:0045141; P:meiotic telomere clustering; IMP:SGD.::GO:0000750; P:pheromone-dependent signal transduction involved in conjugation with cellular fusion; IGI:SGD.
2O59810    1279   YJVE_SCHPO KH domain-containing protein C550....4650.0000000000001     80.1     24     47GO:0005829; C:cytosol; IDA:PomBase.::GO:0005783; C:endoplasmic reticulum; IDA:PomBase.::GO:0042175; C:nuclear outer membrane-endoplasmic reticulum membrane network; IDA:PomBase.
GO:0003677; F:DNA binding; ISS:PomBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0034605; P:cellular response to heat; IMP:PomBase.::GO:0006342; P:chromatin silencing; ISS:PomBase.::GO:0008298; P:intracellular mRNA localization; ISS:PomBase.
3Q8VDJ3    1268   VIGLN_MOUSE Vigilin OS=Mus musculus (Mouse). ...1250.003     45.8     29     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0034364; C:high-density lipoprotein particle; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.::GO:0006869; P:lipid transport; IEA:UniProtKB-KW.
4Q9Z1A6    1268   VIGLN_RAT Vigilin OS=Rattus norvegicus (Rat)....1250.003     45.8     29     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0034364; C:high-density lipoprotein particle; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.::GO:0006869; P:lipid transport; IEA:UniProtKB-KW.
5Q00341    1268   VIGLN_HUMAN Vigilin OS=Homo sapiens (Human). ...2550.01     43.9     24     44GO:0005737; C:cytoplasm; IDA:HPA.::GO:0034364; C:high-density lipoprotein particle; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; TAS:ProtInc.
GO:0008289; F:lipid binding; TAS:ProtInc.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0008203; P:cholesterol metabolic process; TAS:ProtInc.::GO:0006869; P:lipid transport; IEA:UniProtKB-KW.
6Q5R439    1268   VIGLN_PONAB Vigilin OS=Pongo abelii (Sumatran...844.4     35.4     30     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0034364; C:high-density lipoprotein particle; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.::GO:0006869; P:lipid transport; IEA:UniProtKB-KW.
7P81021    1270   VIGLN_CHICK Vigilin OS=Gallus gallus (Chicken...1250.0005     48.5     30     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
8Q99MQ1    977   BICC1_MOUSE Protein bicaudal C homolog 1 OS=M...2350.15     40     20     40
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
9Q9H694    974   BICC1_HUMAN Protein bicaudal C homolog 1 OS=H...2480.31     38.9     19     40
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.
10Q5U4T7    970   BIC1B_XENLA Protein bicaudal C homolog 1-B OS...1420.35     38.9     23     44
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
11Q9IA00    963   BIC1A_XENLA Protein bicaudal C homolog 1-A OS...940.78     37.7     28     48
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
12Q9Y2W6    561   TDRKH_HUMAN Tudor and KH domain-containing pr...1230.01     43.9     30     47
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
13Q91WJ8    651   FUBP1_MOUSE Far upstream element-binding prot...1441.1     37     24     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:MGI.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
14Q96I24    572   FUBP3_HUMAN Far upstream element-binding prot...2670.15     40     21     39GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IDA:UniProtKB.
15Q96AE4    644   FUBP1_HUMAN Far upstream element-binding prot...1440.86     37.4     24     47GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.::GO:0003697; F:single-stranded DNA binding; TAS:ProtInc.
GO:0010628; P:positive regulation of gene expression; IDA:UniProtKB.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
16Q80VL1    560   TDRKH_MOUSE Tudor and KH domain-containing pr...1230.024     42.4     30     46GO:0005739; C:mitochondrion; IDA:MGI.
GO:0005515; F:protein binding; IPI:MGI.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
17P51115    676   FXR1A_XENLA Fragile X mental retardation synd...1900.007     44.3     28     43GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003723; F:RNA binding; IDA:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007517; P:muscle organ development; IDA:UniProtKB.
18P26340    480   MANC_SALTY Mannose-1-phosphate guanylyltransf...1140.007     43.9     27     42
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0004475; F:mannose-1-phosphate guanylyltransferase activity; IEA:EC.
GO:0009103; P:lipopolysaccharide biosynthetic process; IEA:UniProtKB-KW.
19Q61990    362   PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus...1691.9     36.2     23     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0050687; P:negative regulation of defense response to virus; ISS:UniProtKB.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.
20Q15366    365   PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Hom...1722     35.8     23     47GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005634; C:nucleus; IDA:HPA.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0031625; F:ubiquitin protein ligase binding; IPI:UniProtKB.
GO:0045087; P:innate immune response; TAS:Reactome.::GO:0050687; P:negative regulation of defense response to virus; IMP:UniProtKB.::GO:0032480; P:negative regulation of type I interferon production; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:UniProtKB.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.
21Q32PX7    639   FUBP1_RAT Far upstream element-binding protei...1440.95     37.4     24     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
22O19048    356   PCBP1_RABIT Poly(rC)-binding protein 1 OS=Ory...888.6     33.9     32     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
23P60335    356   PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus...888.6     33.9     32     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; TAS:MGI.::GO:0008494; F:translation activator activity; TAS:MGI.
GO:0006397; P:mRNA processing; TAS:MGI.
24Q15365    356   PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Hom...888.6     33.9     32     51GO:0005737; C:cytoplasm; NAS:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IDA:UniProtKB.::GO:0003697; F:single-stranded DNA binding; IDA:UniProtKB.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.
25Q5E9A3    356   PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos...888.6     33.9     32     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; ISS:AgBase.::GO:0003697; F:single-stranded DNA binding; ISS:AgBase.
26Q8UVD9    769   FUBP2_CHICK Far upstream element-binding prot...2580.28     39.3     20     38GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.
GO:0008298; P:intracellular mRNA localization; NAS:UniProtKB.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
27P57721    371   PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Hom...1083.3     35.4     25     49GO:0005829; C:cytosol; IDA:UniProtKB.::GO:0005739; C:mitochondrion; IDA:HPA.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; NAS:UniProtKB.
GO:0016071; P:mRNA metabolic process; NAS:UniProtKB.
28Q8F7J8    698   PNP_LEPIN Polyribonucleotide nucleotidyltrans...950.051     41.6     37     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
29Q72NX7    698   PNP_LEPIC Polyribonucleotide nucleotidyltrans...950.051     41.6     37     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
30P57722    371   PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus...1083.1     35.4     25     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
31B2UUX6    688   PNP_HELPS Polyribonucleotide nucleotidyltrans...1021.5     36.6     27     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
records
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