Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YJL074C
Length:
1230
Number of sequences:
5887
Description:
YJL074C SMC3 SGDID:S000003610, Chr X from 302849-299157, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the multiprotein cohesin complex required for sister chromatid cohesion in mitotic cells; also required, with Rec8p, for cohesion and recombination during meiosis; phylogenetically conserved SMC chromosomal ATPase family member"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q5JHN1    883   RAD50_PYRKO DNA double-strand break repair Ra...450.085     40.8     44     67
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
92Q8IY18    1101   SMC5_HUMAN Structural maintenance of chromoso...1710.033     42.4     23     43GO:0000781; C:chromosome, telomeric region; IDA:UniProtKB.::GO:0016605; C:PML body; IDA:UniProtKB.::GO:0030915; C:Smc5-Smc6 complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0090398; P:cellular senescence; IMP:UniProtKB.::GO:0000724; P:double-strand break repair via homologous recombination; IMP:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0034184; P:positive regulation of maintenance of mitotic sister chromatid cohesion; IMP:UniProtKB.::GO:0045842; P:positive regulation of mitotic metaphase/anaphase transition; IMP:UniProtKB.::GO:0000722; P:telomere maintenance via recombination; IMP:UniProtKB.
93O58687    879   RAD50_PYRHO DNA double-strand break repair Ra...2812     36.2     23     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
94Q9Z9J3    278   ECFA1_BACHD Energy-coupling factor transporte...780.0008     46.6     40     55GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
95Q97WH0    864   RAD50_SULSO DNA double-strand break repair Ra...2590.006     44.7     26     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
96O13710    1076   SMC5_SCHPO Structural maintenance of chromoso...1630.0008     47.4     26     40GO:0000935; C:barrier septum; IEA:UniProtKB-SubCell.::GO:0032153; C:cell division site; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0030915; C:Smc5-Smc6 complex; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046982; F:protein heterodimerization activity; IPI:PomBase.
GO:0000724; P:double-strand break repair via homologous recombination; TAS:PomBase.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048478; P:replication fork protection; IC:PomBase.
97P05824    553   RECN_ECOLI DNA repair protein recN OS=Escheri...2310.001     47     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
98B7KID4    384   RECF_CYAP7 DNA replication and repair protein...1140.001     46.2     26     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
99Q54CS9    1351   RAD50_DICDI DNA repair protein RAD50 OS=Dicty...990.002     46.2     25     54GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0030870; C:Mre11 complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:dictyBase.::GO:0003690; F:double-stranded DNA binding; ISS:dictyBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0030674; F:protein binding, bridging; ISS:UniProtKB.::GO:0042803; F:protein homodimerization activity; ISS:dictyBase.
GO:0006310; P:DNA recombination; ISS:UniProtKB.::GO:0006303; P:double-strand break repair via nonhomologous end joining; ISS:dictyBase.::GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0000019; P:regulation of mitotic recombination; ISS:UniProtKB.::GO:0007004; P:telomere maintenance via telomerase; ISS:UniProtKB.
100Q03I76    366   RECF_STRTD DNA replication and repair protein...810.003     45.1     31     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
101Q5LXI7    366   RECF_STRT1 DNA replication and repair protein...810.003     45.1     31     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
102Q8DWQ8    369   RECF_STRA5 DNA replication and repair protein...480.003     45.1     40     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
103Q8E2K7    369   RECF_STRA3 DNA replication and repair protein...480.003     45.1     40     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
104Q5M237    366   RECF_STRT2 DNA replication and repair protein...810.003     45.1     31     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
105Q3JYE9    369   RECF_STRA1 DNA replication and repair protein...480.003     45.1     40     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
106B9DWE6    364   RECF_STRU0 DNA replication and repair protein...480.004     44.7     44     63GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
107Q9HLR8    896   RAD50_THEAC DNA double-strand break repair Ra...851.7     36.6     31     52
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
108Q8D0W8    363   CYSA_YERPE Sulfate/thiosulfate import ATP-bin...1020.004     44.7     34     50GO:0043190; C:ATP-binding cassette (ABC) transporter complex; IEA:InterPro.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0015419; F:sulfate transmembrane-transporting ATPase activity; IEA:EC.
109Q49XE1    1009   SBCC_STAS1 Nuclease sbcCD subunit C OS=DSM 20...2120.004     45.1     24     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
110Q9S220    572   RECN_STRCO DNA repair protein recN OS=Strepto...2650.004     45.1     20     40
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
111Q08204    1093   SMC5_YEAST Structural maintenance of chromoso...2220.005     45.1     23     46GO:0005634; C:nucleus; IDA:SGD.::GO:0030915; C:Smc5-Smc6 complex; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:SGD.::GO:0003684; F:damaged DNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003697; F:single-stranded DNA binding; IDA:SGD.
GO:0034500; P:rDNA separation; IMP:SGD.::GO:0000725; P:recombinational repair; IPI:SGD.::GO:0071139; P:resolution of recombination intermediates; IMP:SGD.
112A8LVH1    376   RECF_SALAI DNA replication and repair protein...780.006     43.9     29     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
113Q58718    1005   RAD50_METJA DNA double-strand break repair Ra...1120.014     43.5     27     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
114Q668K6    363   CYSA_YERPS Sulfate/thiosulfate import ATP-bin...1020.011     43.1     33     50GO:0043190; C:ATP-binding cassette (ABC) transporter complex; IEA:InterPro.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0015419; F:sulfate transmembrane-transporting ATPase activity; IEA:EC.
115P74374    584   RECN_SYNY3 DNA repair protein recN OS=Synecho...1110.013     43.5     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
116Q0AU85    345   METN_SYNWW Methionine import ATP-binding prot...940.014     42.7     36     50GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0015424; F:amino acid-transporting ATPase activity; IEA:InterPro.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0015821; P:methionine transport; IEA:InterPro.
117Q96YR5    879   RAD50_SULTO DNA double-strand break repair Ra...1110.056     41.6     28     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
118P0C6Q4    554   RECN_VIBCH DNA repair protein recN OS=Vibrio ...910.017     43.1     29     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
119A5F379    554   RECN_VIBC3 DNA repair protein recN OS=Vibrio ...910.017     43.1     29     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006310; P:DNA recombination; IEA:InterPro.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
120O33600    886   RAD50_SULAC DNA double-strand break repair Ra...851.7     36.6     32     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
121Q74M31    374   RECF_LACJO DNA replication and repair protein...480.032     41.6     40     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 372 91 - 120
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::