Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YJL050W
Length:
1073
Number of sequences:
5887
Description:
YJL050W MTR4 SGDID:S000003586, Chr X from 342522-345743, Genome Release 64-1-1, Verified ORF, "ATP-dependent 3'-5' RNA helicase of the Dead-box family, involved in nuclear RNA processing and degradation both as a component of the TRAMP complex and in TRAMP independent processes; has a KOW domain that shows RNA binding activity"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
181A5FR32    412   HISZ_DEHSB ATP phosphoribosyltransferase regu...2047.4     33.9     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0004821; F:histidine-tRNA ligase activity; IEA:InterPro.
GO:0000105; P:histidine biosynthetic process; IEA:UniProtKB-KW.::GO:0006427; P:histidyl-tRNA aminoacylation; IEA:InterPro.
182Q2LPW5    723   SYD1_SYNAS Aspartate--tRNA ligase 1 OS=Syntro...1087.4     34.3     31     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004815; F:aspartate-tRNA ligase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006418; P:tRNA aminoacylation for protein translation; IEA:InterPro.
183Q0DVX2    641   RH50_ORYSJ DEAD-box ATP-dependent RNA helicas...1607.6     34.3     21     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IDA:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006968; P:cellular defense response; IDA:UniProtKB.::GO:0071369; P:cellular response to ethylene stimulus; IEP:UniProtKB.::GO:0071395; P:cellular response to jasmonic acid stimulus; IEP:UniProtKB.::GO:0071446; P:cellular response to salicylic acid stimulus; IEP:UniProtKB.::GO:0009817; P:defense response to fungus, incompatible interaction; IDA:UniProtKB.
184Q6CX73    398   FAL1_KLULA ATP-dependent RNA helicase FAL1 OS...1897.6     33.9     23     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
185P0CQ80    625   DHH1_CRYNJ ATP-dependent RNA helicase DHH1 OS...1637.6     34.3     25     41GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
186P0CQ81    625   DHH1_CRYNB ATP-dependent RNA helicase DHH1 OS...1637.6     34.3     25     41GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
187A5ELK8    161   RL15_BRASB 50S ribosomal protein L15 OS=Brady...917.9     33.1     26     43GO:0015934; C:large ribosomal subunit; IEA:InterPro.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
188Q94BV4    528   RH6_ARATH DEAD-box ATP-dependent RNA helicase...1608.6     33.9     23     40GO:0000932; C:cytoplasmic mRNA processing body; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
189Q3ZXL5    412   HISZ_DEHSC ATP phosphoribosyltransferase regu...2049.9     33.5     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0004821; F:histidine-tRNA ligase activity; IEA:InterPro.
GO:0000105; P:histidine biosynthetic process; IEA:UniProtKB-KW.::GO:0006427; P:histidyl-tRNA aminoacylation; IEA:InterPro.
190A3LS22    484   RRP3_PICST ATP-dependent rRNA helicase RRP3 O...17910     33.9     24     37GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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