rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | P47047 | 1073 | MTR4_YEAST ATP-dependent RNA helicase DOB1 OS... | 1073 | 0 | 2218 | 100 | 100 | GO:0005730; C:nucleolus; IDA:SGD.::GO:0031499; C:TRAMP complex; IDA:SGD. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0034459; F:ATP-dependent 3'-5' RNA helicase activity; IDA:SGD.::GO:0016491; F:oxidoreductase activity; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0043629; P:ncRNA polyadenylation; IDA:SGD.::GO:0071042; P:nuclear polyadenylation-dependent mRNA catabolic process; IMP:SGD.::GO:0071035; P:nuclear polyadenylation-dependent rRNA catabolic process; IMP:SGD.::GO:0071038; P:nuclear polyadenylation-dependent tRNA catabolic process; IDA:SGD.::GO:0071049; P:nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription; IGI:SGD.::GO:0071051; P:polyadenylation-dependent snoRNA 3'-end processing; IMP:SGD.::GO:0034475; P:U4 snRNA 3'-end processing; IMP:SGD.::GO:0034476; P:U5 snRNA 3'-end processing; IMP:SGD. | 2 | O14232 | 1117 | MTR4_SCHPO ATP-dependent RNA helicase mtr4 OS... | 1012 | 0 | 1336 | 65 | 79 | GO:0005730; C:nucleolus; ISS:PomBase.::GO:0031499; C:TRAMP complex; IDA:PomBase. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:PomBase.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | GO:0043630; P:ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process; ISS:PomBase.::GO:0071049; P:nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription; ISS:PomBase.::GO:0006364; P:rRNA processing; ISS:PomBase.::GO:0016078; P:tRNA catabolic process; ISS:PomBase. | 3 | Q9CZU3 | 1040 | SK2L2_MOUSE Superkiller viralicidic activity ... | 954 | 0 | 1113 | 56 | 75 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 4 | P42285 | 1042 | SK2L2_HUMAN Superkiller viralicidic activity ... | 954 | 0 | 1106 | 56 | 75 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct. | | | | | | | | | | GO:0000460; P:maturation of 5.8S rRNA; IMP:UniProtKB.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB. | 5 | O13799 | 1030 | YE02_SCHPO Uncharacterized helicase C17H9.02 ... | 958 | 0 | 974 | 49 | 71 | GO:0005730; C:nucleolus; ISS:PomBase.::GO:0031499; C:TRAMP complex; ISS:PomBase. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:PomBase.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | GO:0043630; P:ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process; ISS:PomBase.::GO:0071049; P:nuclear retention of pre-mRNA with aberrant 3'-ends at the site of transcription; ISS:PomBase.::GO:0006364; P:rRNA processing; ISS:PomBase.::GO:0016078; P:tRNA catabolic process; ISS:PomBase. | 6 | Q23223 | 1026 | MTR4_CAEEL mRNA transport homolog 4 OS=Caenor... | 953 | 0 | 907 | 47 | 67 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040022; P:feminization of hermaphroditic germ-line; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0042127; P:regulation of cell proliferation; IMP:WormBase.::GO:0040020; P:regulation of meiosis; IMP:WormBase. | 7 | Q15477 | 1246 | SKIV2_HUMAN Helicase SKI2W OS=Homo sapiens (H... | 996 | 0 | 599 | 36 | 56 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0055087; C:Ski complex; IDA:UniProtKB. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; TAS:ProtInc.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 8 | O59801 | 1213 | SKI2_SCHPO Putative ATP-dependent RNA helicas... | 966 | 0 | 591 | 37 | 56 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; ISS:PomBase.::GO:0055087; C:Ski complex; ISS:PomBase. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0003724; F:RNA helicase activity; ISS:PomBase. | | | | | | | | | | GO:0006402; P:mRNA catabolic process; ISS:PomBase.::GO:2000765; P:regulation of cytoplasmic translation; ISS:PomBase. | 9 | P35207 | 1287 | SKI2_YEAST Antiviral helicase SKI2 OS=Sacchar... | 218 | 7e-32 | 138 | 38 | 58 | GO:0055087; C:Ski complex; IDA:SGD. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0070478; P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay; IMP:SGD.::GO:0070481; P:nuclear-transcribed mRNA catabolic process, non-stop decay; IMP:SGD.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW. | 10 | Q9ZBD8 | 920 | HELY_MYCLE Probable helicase helY OS=Mycobact... | 890 | 2e-87 | 307 | 28 | 48 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | | 11 | Q10701 | 906 | HELY_MYCTU Probable helicase helY OS=Mycobact... | 252 | 0.044 | 41.6 | 19 | 38 | GO:0005618; C:cell wall; IDA:MTBBASE.::GO:0005829; C:cytosol; IDA:MTBBASE.::GO:0005886; C:plasma membrane; IDA:MTBBASE. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | | 12 | B9DFG3 | 1171 | ISE2_ARATH DEAD-box ATP-dependent RNA helicas... | 482 | 9e-77 | 279 | 37 | 52 | GO:0009570; C:chloroplast stroma; IDA:TAIR.::GO:0010494; C:cytoplasmic stress granule; IDA:TAIR. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.::GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0010497; P:plasmodesmata-mediated intercellular transport; IMP:TAIR.::GO:0016441; P:posttranscriptional gene silencing; IMP:TAIR. | 13 | Q4JC00 | 705 | HELS_SULAC Putative ski2-type helicase OS=NBR... | 436 | 4e-38 | 156 | 29 | 50 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 14 | Q97VY9 | 708 | HELS_SULSO Putative ski2-type helicase OS=P2)... | 500 | 6e-36 | 149 | 28 | 49 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 15 | Q974S1 | 704 | HELS_SULTO Putative ski2-type helicase OS=Sul... | 432 | 1e-35 | 149 | 29 | 49 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 16 | Q9HJX7 | 674 | HELS_THEAC Putative ski2-type helicase OS=NBR... | 434 | 4e-35 | 147 | 28 | 47 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 17 | Q97AI2 | 674 | HELS_THEVO Putative ski2-type helicase OS=154... | 447 | 2e-34 | 144 | 28 | 46 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | | 18 | Q12WZ6 | 760 | HELS_METBU Putative ski2-type helicase OS=Met... | 415 | 3e-31 | 135 | 28 | 47 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 19 | Q8TL39 | 730 | HELS_METAC Putative ski2-type helicase OS=C2A... | 437 | 3e-31 | 135 | 27 | 47 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 20 | A7IB61 | 723 | HELS_METB6 Putative ski2-type helicase OS=Met... | 436 | 4e-31 | 135 | 26 | 47 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | | 21 | Q9V0A9 | 715 | HELS_PYRAB Putative ski2-type helicase OS=Pyr... | 481 | 2e-29 | 129 | 27 | 45 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:HAMAP.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:HAMAP. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 22 | Q8PZR7 | 730 | HELS_METMA Putative ski2-type helicase OS=JCM... | 413 | 3e-29 | 129 | 28 | 48 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | | 23 | Q465R3 | 729 | HELS_METBF Putative ski2-type helicase OS=Met... | 476 | 5e-29 | 128 | 26 | 46 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 24 | O59025 | 715 | HELS_PYRHO Putative ski2-type helicase OS=NBR... | 485 | 2e-28 | 126 | 26 | 44 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 25 | P51979 | 1187 | HFM1_YEAST ATP-dependent DNA helicase MER3 OS... | 483 | 1e-26 | 121 | 25 | 44 | GO:0005634; C:nucleus; IDA:SGD. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003678; F:DNA helicase activity; IDA:SGD.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006268; P:DNA unwinding involved in replication; IDA:SGD.::GO:0007131; P:reciprocal meiotic recombination; IMP:SGD.::GO:0007129; P:synapsis; IMP:SGD. | 26 | Q0W6L1 | 740 | HELS_UNCMA Putative ski2-type helicase OS=Unc... | 422 | 1e-26 | 120 | 27 | 46 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 27 | A8MB76 | 756 | HELS_CALMQ Putative ski2-type helicase OS=/ I... | 437 | 2e-26 | 120 | 27 | 45 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 28 | A3MSA1 | 708 | HELS_PYRCJ Putative ski2-type helicase OS=Pyr... | 523 | 3e-26 | 119 | 27 | 45 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 29 | O73946 | 720 | HELS_PYRFU Putative ski2-type helicase OS=Pyr... | 485 | 3e-25 | 116 | 25 | 45 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 30 | Q5UYM9 | 799 | HELS_HALMA Putative ski2-type helicase OS=B-1... | 428 | 3e-25 | 116 | 27 | 46 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:InterPro. | 31 | Q9U2G0 | 2145 | U520_CAEEL Putative U5 small nuclear ribonucl... | 200 | 0.0006 | 48.1 | 26 | 46 | GO:0005681; C:spliceosomal complex; ISS:UniProtKB. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro. | | | | | | | | | | GO:0016477; P:cell migration; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0008406; P:gonad development; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0042127; P:regulation of cell proliferation; IMP:WormBase.::GO:0040020; P:regulation of meiosis; IMP:WormBase.::GO:0008380; P:RNA splicing; ISS:UniProtKB. |