Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YJL025W
Length:
514
Number of sequences:
5887
Description:
YJL025W RRN7 SGDID:S000003562, Chr X from 393967-395511, Genome Release 64-1-1, Verified ORF, "Component of the core factor (CF) rDNA transcription factor complex; CF is required for transcription of 35S rRNA genes by RNA polymerase I and is composed of Rrn6p, Rrn7p, and Rrn11p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P40992    514   RRN7_YEAST RNA polymerase I-specific transcri...5140     1073     100     100GO:0070860; C:RNA polymerase I core factor complex; IDA:UniProtKB.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0001164; F:RNA polymerase I CORE element sequence-specific DNA binding; IDA:UniProtKB.::GO:0001187; F:RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity; IDA:UniProtKB.::GO:0017025; F:TBP-class protein binding; IDA:SGD.
2Q9UST5    537   RRN7_SCHPO RNA polymerase I-specific transcri...1310.0007     45.8     24     42GO:0005829; C:cytosol; IDA:PomBase.::GO:0000120; C:RNA polymerase I transcription factor complex; IDA:PomBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:PomBase.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006360; P:transcription from RNA polymerase I promoter; IDA:PomBase.
3Q5ZJR9    582   TAF1B_CHICK TATA box-binding protein-associat...1400.001     45.4     24     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0001164; F:RNA polymerase I CORE element sequence-specific DNA binding; ISS:UniProtKB.::GO:0001187; F:RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity; ISS:UniProtKB.
4Q32N22    582   TAF1B_XENLA TATA box-binding protein-associat...1940.003     43.9     22     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0001164; F:RNA polymerase I CORE element sequence-specific DNA binding; ISS:UniProtKB.::GO:0001187; F:RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity; ISS:UniProtKB.
5F7BLM1    596   TAF1B_XENTR TATA box-binding protein-associat...1266.2     33.1     22     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0001164; F:RNA polymerase I CORE element sequence-specific DNA binding; ISS:UniProtKB.::GO:0001187; F:RNA polymerase I CORE element sequence-specific DNA binding transcription factor recruiting transcription factor activity; ISS:UniProtKB.
6Q18685    720   UN112_CAEEL Protein unc-112 OS=Caenorhabditis...756.4     33.1     28     52GO:0030055; C:cell-substrate junction; IDA:WormBase.::GO:0031430; C:M band; IDA:WormBase.::GO:0055120; C:striated muscle dense body; IDA:WormBase.
GO:0050839; F:cell adhesion molecule binding; IDA:UniProtKB.::GO:0005543; F:phospholipid binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IMP:WormBase.
GO:0007160; P:cell-matrix adhesion; IDA:UniProtKB.::GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040039; P:inductive cell migration; IMP:WormBase.::GO:0007517; P:muscle organ development; IDA:UniProtKB.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0071688; P:striated muscle myosin thick filament assembly; IMP:WormBase.
7A5UCK0    416   CCA_HAEIE Multifunctional CCA protein OS=Haem...619.7     32.3     30     54
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0052929; F:ATP:3'-cytidine-cytidine-tRNA adenylyltransferase activity; IEA:EC.::GO:0052928; F:CTP:3'-cytidine-tRNA cytidylyltransferase activity; IEA:EC.::GO:0052927; F:CTP:tRNA cytidylyltransferase activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008081; F:phosphoric diester hydrolase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0004810; F:tRNA adenylyltransferase activity; IEA:InterPro.
GO:0042245; P:RNA repair; IEA:UniProtKB-KW.::GO:0001680; P:tRNA 3'-terminal CCA addition; IEA:EC.
records
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