Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YJL006C
Length:
323
Number of sequences:
5887
Description:
YJL006C CTK2 SGDID:S000003543, Chr X from 424109-423138, Genome Release 64-1-1, reverse complement, Verified ORF, "Beta subunit of C-terminal domain kinase I (CTDK-I), which phosphorylates both RNA pol II subunit Rpo21p to affect transcription and pre-mRNA 3' end processing, and ribosomal protein Rps2p to increase translational fidelity"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P46962    323   CTK2_YEAST CTD kinase subunit beta OS=Sacchar...3230     665     100     100GO:0005730; C:nucleolus; IDA:SGD.::GO:0005654; C:nucleoplasm; IDA:SGD.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IPI:GOC.::GO:0031124; P:mRNA 3'-end processing; IC:SGD.::GO:0032786; P:positive regulation of transcription elongation, DNA-dependent; IDA:SGD.::GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; IMP:SGD.::GO:0045903; P:positive regulation of translational fidelity; IPI:SGD.::GO:0006468; P:protein phosphorylation; IPI:SGD.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006974; P:response to DNA damage stimulus; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
2O59748    325   CTK2_SCHPO CTD kinase subunit beta OS=Schizos...2748e-19     88.6     29     47GO:0032806; C:carboxy-terminal domain protein kinase complex; IPI:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.
GO:0016538; F:cyclin-dependent protein kinase regulator activity; ISS:PomBase.::GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0031565; P:cytokinesis checkpoint; IMP:PomBase.::GO:0002182; P:cytoplasmic translational elongation; NAS:PomBase.::GO:0031124; P:mRNA 3'-end processing; ISS:PomBase.::GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IMP:PomBase.::GO:0031031; P:positive regulation of septation initiation signaling cascade; IMP:PomBase.::GO:0045903; P:positive regulation of translational fidelity; ISS:PomBase.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; NAS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
3O75909    580   CCNK_HUMAN Cyclin-K OS=Homo sapiens (Human). ...1780.00000000006     67     28     48
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
4O88874    554   CCNK_MOUSE Cyclin-K OS=Mus musculus (Mouse). ...1780.00000000007     66.6     28     48
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
5Q9FJK7    253   CCC12_ARATH Cyclin-C1-2 OS=Arabidopsis thalia...2210.000004     50.8     24     45GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
6Q2RAC5    490   CCT13_ORYSJ Cyclin-T1-3 OS=Oryza sativa subsp...2060.000006     51.2     24     44GO:0005634; C:nucleus; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
7Q8GYM6    541   CCT14_ARATH Cyclin-T1-4 OS=Arabidopsis thalia...1700.000007     51.2     26     42GO:0005634; C:nucleus; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0048366; P:leaf development; IGI:TAIR.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0009615; P:response to virus; IEP:TAIR.::GO:0010090; P:trichome morphogenesis; IMP:TAIR.
8Q9FKE6    579   CCT15_ARATH Cyclin-T1-5 OS=Arabidopsis thalia...2160.00002     49.7     25     41GO:0005634; C:nucleus; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0009908; P:flower development; IMP:TAIR.::GO:0048366; P:leaf development; IGI:TAIR.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0050792; P:regulation of viral reproduction; IMP:TAIR.::GO:0009615; P:response to virus; IEP:TAIR.::GO:0010090; P:trichome morphogenesis; IMP:TAIR.
9O74627    342   CG1C_SCHPO Cyclin pch1 OS=Schizosaccharomyces...1700.00002     49.3     24     48GO:0005829; C:cytosol; IDA:PomBase.::GO:0008024; C:positive transcription elongation factor complex b; TAS:PomBase.
GO:0016538; F:cyclin-dependent protein kinase regulator activity; NAS:PomBase.::GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; TAS:PomBase.::GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IDA:PomBase.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; NAS:PomBase.::GO:0034243; P:regulation of transcription elongation from RNA polymerase II promoter; NAS:PomBase.
10Q2QQS5    543   CCT14_ORYSJ Cyclin-T1-4 OS=Oryza sativa subsp...1730.00003     49.3     25     43GO:0005634; C:nucleus; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
11Q5ZJP9    534   CCNL1_CHICK Cyclin-L1 OS=Gallus gallus (Chick...2090.00006     48.1     22     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
12Q5I0H5    520   CCNL2_RAT Cyclin-L2 OS=Rattus norvegicus (Rat...1980.00009     47.4     22     41GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
13Q9JJA7    518   CCNL2_MOUSE Cyclin-L2 OS=Mus musculus (Mouse)...2090.0001     47.4     22     41GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
14P25008    267   CCNC_DROME Cyclin-C OS=Drosophila melanogaste...1970.0002     45.8     25     47GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.::GO:0016592; C:mediator complex; IDA:UniProtKB.
GO:0016538; F:cyclin-dependent protein kinase regulator activity; IDA:FlyBase.::GO:0019901; F:protein kinase binding; IEA:InterPro.::GO:0001104; F:RNA polymerase II transcription cofactor activity; IMP:UniProtKB.
GO:0022416; P:chaeta development; IMP:FlyBase.::GO:0036011; P:imaginal disc-derived leg segmentation; IMP:FlyBase.::GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:FlyBase.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0045498; P:sex comb development; IMP:FlyBase.
15Q29AI1    267   CCNC_DROPS Cyclin-C OS=Drosophila pseudoobscu...1970.0003     45.1     25     47GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.::GO:0016592; C:mediator complex; ISS:UniProtKB.
GO:0019901; F:protein kinase binding; IEA:InterPro.::GO:0001104; F:RNA polymerase II transcription cofactor activity; ISS:UniProtKB.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.
16P93411    257   CCC11_ORYSJ Cyclin-C1-1 OS=Oryza sativa subsp...2130.0003     45.1     26     45GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
17Q7QB13    266   CCNC_ANOGA Cyclin-C OS=Anopheles gambiae (Afr...2500.0006     44.3     23     43GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
18Q96S94    520   CCNL2_HUMAN Cyclin-L2 OS=Homo sapiens (Human)...1990.002     43.5     21     41GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
19Q9C8P7    247   CCT11_ARATH Putative cyclin-T1-1 OS=Arabidops...2050.002     42.7     21     40
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
20Q6Z7H3    630   CCT12_ORYSJ Cyclin-T1-2 OS=Oryza sativa subsp...2020.002     43.5     23     44
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
21Q16JA2    265   CCNC_AEDAE Cyclin-C OS=Aedes aegypti (Yellowf...2620.002     42.7     23     44GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
22Q5BKF8    497   CCNL2_XENTR Cyclin-L2 OS=Xenopus tropicalis (...1980.003     42.7     22     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
23Q7ZVX0    498   CCNL1_DANRE Cyclin-L1 OS=Danio rerio (Zebrafi...1970.012     40.8     22     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
24Q9FJK6    253   CCC11_ARATH Cyclin-C1-1 OS=Arabidopsis thalia...1600.059     38.1     25     46GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
25O94612    258   YFO5_SCHPO Uncharacterized cyclin-L1-like pro...1850.062     38.1     22     41GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0016538; F:cyclin-dependent protein kinase regulator activity; NAS:PomBase.::GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; NAS:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
26Q56YF8    460   CCT12_ARATH Cyclin-T1-2 OS=Arabidopsis thalia...980.14     37.4     29     49
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
27Q86KE7    255   CCNC_DICDI Cyclin-C OS=Dictyostelium discoide...1910.17     36.6     24     42GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0016538; F:cyclin-dependent protein kinase regulator activity; ISS:dictyBase.::GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:dictyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
28Q0E474    446   CCT11_ORYSJ Cyclin-T1-1 OS=Oryza sativa subsp...1890.22     37     22     42
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
29O13749    340   TF2B_SCHPO Transcription initiation factor II...700.46     35.8     20     49GO:0005634; C:nucleus; IDA:PomBase.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IDA:PomBase.
30Q08844    703   YO365_YEAST Uncharacterized membrane protein ...660.75     35.4     27     47GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
31Q8W5S1    336   CCH11_ARATH Cyclin-H1-1 OS=Arabidopsis thalia...1701.1     34.7     22     42GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005675; C:holo TFIIH complex; IEA:InterPro.
GO:0004672; F:protein kinase activity; IDA:TAIR.::GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
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