Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YIR012W
Length:
431
Number of sequences:
5887
Description:
YIR012W SQT1 SGDID:S000001451, Chr IX from 378486-379781, Genome Release 64-1-1, Verified ORF, "Essential protein involved in a late step of 60S ribosomal subunit assembly or modification; contains multiple WD repeats; interacts with Qsr1p in a two-hybrid assay"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61Q29RQ3    608   DC1I1_BOVIN Cytoplasmic dynein 1 intermediate...2950.076     38.9     22     34GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005868; C:cytoplasmic dynein complex; IDA:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.::GO:0031982; C:vesicle; ISS:UniProtKB.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
GO:0006810; P:transport; IEA:UniProtKB-KW.
62Q6H8D5    910   COB22_ORYSJ Coatomer subunit beta'-2 OS=Oryza...1200.078     39.3     25     42GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
63Q20168    1000   COPB2_CAEEL Probable coatomer subunit beta' O...1020.087     38.9     27     44GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0006886; P:intracellular protein transport; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048599; P:oocyte development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0032940; P:secretion by cell; IMP:WormBase.
64B3NQR5    335   CIAO1_DROER Probable cytosolic iron-sulfur pr...1790.09     38.5     23     39
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
65Q96DI7    357   SNR40_HUMAN U5 small nuclear ribonucleoprotei...1410.75     35.4     21     38GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005732; C:small nucleolar ribonucleoprotein complex; NAS:UniProtKB.::GO:0005682; C:U5 snRNP; TAS:ProtInc.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.
66B4GQJ7    1065   WDY_DROPE WD repeat-containing protein on Y c...2550.1     38.9     20     39
GO:0005509; F:calcium ion binding; IEA:InterPro.
67B6K1G6    616   CFD1_SCHJY Probable cytosolic Fe-S cluster as...960.1     38.5     26     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
68B5DHW4    1064   WDY_DROPS WD repeat-containing protein on Y c...2550.1     38.9     20     39
GO:0005509; F:calcium ion binding; IEA:InterPro.
69B7FF09    1089   WDY_DROWI WD repeat-containing protein on Y c...2440.11     38.9     20     39
GO:0005509; F:calcium ion binding; IEA:InterPro.
70P41811    889   COPB2_YEAST Coatomer subunit beta' OS=Sacchar...2500.11     38.5     24     37GO:0030126; C:COPI vesicle coat; IGI:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0032511; P:late endosome to vacuole transport via multivesicular body sorting pathway; IMP:SGD.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
71Q5FVN8    476   WSDU1_RAT WD repeat, SAM and U-box domain-con...2140.11     38.5     24     35GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
72O14576    645   DC1I1_HUMAN Cytoplasmic dynein 1 intermediate...2950.12     38.5     22     34GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005868; C:cytoplasmic dynein complex; ISS:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0048471; C:perinuclear region of cytoplasm; ISS:HGNC.::GO:0000922; C:spindle pole; IDA:UniProtKB.::GO:0031982; C:vesicle; IDA:UniProtKB.
GO:0008017; F:microtubule binding; ISS:HGNC.::GO:0003777; F:microtubule motor activity; ISS:HGNC.
GO:0047496; P:vesicle transport along microtubule; ISS:HGNC.
73O54927    421   WSB1_MOUSE WD repeat and SOCS box-containing ...800.13     38.1     24     41
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
74B7QKS1    315   CIAO1_IXOSC Probable cytosolic iron-sulfur pr...1813.9     33.1     23     40
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
75P78972    488   SLP1_SCHPO WD repeat-containing protein slp1 ...1350.15     38.1     21     41GO:0032153; C:cell division site; IDA:PomBase.::GO:0000778; C:condensed nuclear chromosome kinetochore; IDA:PomBase.::GO:0033597; C:mitotic checkpoint complex; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007092; P:activation of mitotic anaphase-promoting complex activity; TAS:PomBase.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0033314; P:mitotic cell cycle DNA replication checkpoint; IGI:PomBase.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; IGI:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IGI:PomBase.
76O95834    649   EMAL2_HUMAN Echinoderm microtubule-associated...1790.16     38.1     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005875; C:microtubule associated complex; TAS:ProtInc.
GO:0003824; F:catalytic activity; IEA:InterPro.
GO:0007605; P:sensory perception of sound; TAS:ProtInc.::GO:0007601; P:visual perception; TAS:ProtInc.
77Q8C092    801   TAF5_MOUSE Transcription initiation factor TF...829.4     32.3     26     41GO:0005634; C:nucleus; IDA:MGI.
GO:0003677; F:DNA binding; IDA:MGI.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
78Q2KID6    513   PLRG1_BOVIN Pleiotropic regulator 1 OS=Bos ta...1930.2     37.7     21     40GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
79Q5BK30    415   WDR69_RAT Outer row dynein assembly protein 1...990.21     37.4     27     41GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
80Q6ZMW3    1958   EMAL6_HUMAN Echinoderm microtubule-associated...2010.22     37.7     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
81O43660    514   PLRG1_HUMAN Pleiotropic regulator 1 OS=Homo s...1930.22     37.4     21     40GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0004871; F:signal transducer activity; TAS:ProtInc.::GO:0003714; F:transcription corepressor activity; TAS:ProtInc.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.
82B0FXQ5    1064   WDY_DROAN WD repeat-containing protein on Y c...2550.23     37.7     20     38
GO:0005509; F:calcium ion binding; IEA:InterPro.
83Q54YD8    1005   COPB2_DICDI Coatomer subunit beta' OS=Dictyos...770.24     37.7     30     49GO:0030126; C:COPI vesicle coat; ISS:dictyBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
84O74319    642   TAF73_SCHPO Transcription initiation factor T...1570.25     37.4     25     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0005669; C:transcription factor TFIID complex; TAS:PomBase.
GO:0000991; F:core RNA polymerase II binding transcription factor activity; IC:PomBase.
GO:0030071; P:regulation of mitotic metaphase/anaphase transition; IGI:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:PomBase.
85Q9Y6I7    421   WSB1_HUMAN WD repeat and SOCS box-containing ...800.26     37.4     23     41GO:0005622; C:intracellular; IDA:LIFEdb.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
86Q4WT34    453   PRP46_ASPFU Pre-mRNA-splicing factor prp46 OS...1660.27     37.4     20     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
87A7RWD2    327   CIAO1_NEMVE Probable cytosolic iron-sulfur pr...1710.57     35.8     23     37
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
88Q91WQ5    589   TAF5L_MOUSE TAF5-like RNA polymerase II p300/...700.61     36.2     30     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
89P35606    906   COPB2_HUMAN Coatomer subunit beta' OS=Homo sa...990.29     37.4     27     42GO:0015629; C:actin cytoskeleton; IDA:HPA.::GO:0030126; C:COPI vesicle coat; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0048205; P:COPI coating of Golgi vesicle; TAS:Reactome.::GO:0006891; P:intra-Golgi vesicle-mediated transport; IDA:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:UniProtKB.
90P35605    906   COPB2_BOVIN Coatomer subunit beta' OS=Bos tau...990.3     37.4     27     42GO:0030126; C:COPI vesicle coat; IDA:UniProtKB.
GO:0005080; F:protein kinase C binding; ISS:AgBase.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006891; P:intra-Golgi vesicle-mediated transport; TAS:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:UniProtKB.
91Q8SRB0    334   GBLP_ENCCU Guanine nucleotide-binding protein...1930.31     36.6     21     41
records
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