Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YIR012W
Length:
431
Number of sequences:
5887
Description:
YIR012W SQT1 SGDID:S000001451, Chr IX from 378486-379781, Genome Release 64-1-1, Verified ORF, "Essential protein involved in a late step of 60S ribosomal subunit assembly or modification; contains multiple WD repeats; interacts with Qsr1p in a two-hybrid assay"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q6KAU8    623   A16L2_MOUSE Autophagy-related protein 16-2 OS...670.012     41.6     36     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
32B0XAF3    338   CIAO1_CULQU Probable cytosolic iron-sulfur pr...1710.016     40.8     23     40
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
33A0AUS0    487   WSDU1_DANRE WD repeat, SAM and U-box domain-c...1080.017     40.8     28     45GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
34Q4R8E7    415   WDR69_MACFA Outer row dynein assembly protein...820.02     40.8     32     45GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
35Q6P2Y2    415   WDR69_XENTR Outer row dynein assembly protein...750.023     40.4     33     47GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
36Q5RF51    357   SNR40_PONAB U5 small nuclear ribonucleoprotei...1410.4     36.6     21     38GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
37Q7TNG5    649   EMAL2_MOUSE Echinoderm microtubule-associated...2270.023     40.8     22     41GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003824; F:catalytic activity; IEA:InterPro.
38Q6CP71    452   PFS2_KLULA Polyadenylation factor subunit 2 O...1150.024     40.4     25     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
39Q6H8D6    910   COB23_ORYSJ Putative coatomer subunit beta'-3...1200.03     40.4     25     43GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
40Q5BJQ6    431   CSTF1_RAT Cleavage stimulation factor subunit...2150.035     40     22     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
41Q99LC2    431   CSTF1_MOUSE Cleavage stimulation factor subun...2150.035     40     22     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
42O13807    1072   DDB1_SCHPO DNA damage-binding protein 1 OS=Sc...2110.036     40.4     23     45GO:0005829; C:cytosol; IDA:PomBase.::GO:0070912; C:Ddb1-Ckn1 complex; IDA:PomBase.::GO:0070913; C:Ddb1-Wdr21 complex; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0034644; P:cellular response to UV; IMP:PomBase.::GO:0006279; P:premeiotic DNA replication; TAS:PomBase.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IMP:PomBase.::GO:0006282; P:regulation of DNA repair; IMP:PomBase.::GO:0040020; P:regulation of meiosis; IGI:PomBase.::GO:0007090; P:regulation of S phase of mitotic cell cycle; IMP:PomBase.::GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:PomBase.
43P49846    704   TAF5_DROME Transcription initiation factor TF...830.04     40     29     48GO:0000124; C:SAGA complex; IPI:FlyBase.::GO:0005669; C:transcription factor TFIID complex; IDA:FlyBase.
GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IDA:GOC.
44Q6P6T4    649   EMAL2_RAT Echinoderm microtubule-associated p...2270.041     40     22     41GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0003824; F:catalytic activity; IEA:InterPro.::GO:0008022; F:protein C-terminus binding; IDA:RGD.::GO:0005102; F:receptor binding; IDA:RGD.
45Q9W5Z5    427   WSB1_TAKRU WD repeat and SOCS box-containing ...780.043     39.7     27     45
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
46Q6NLV4    647   FY_ARATH Flowering time control protein FY OS...1290.044     39.7     23     44GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IGI:TAIR.::GO:0009909; P:regulation of flower development; IMP:TAIR.
47Q8YV57    1683   Y2124_NOSS1 Uncharacterized WD repeat-contain...2061.3     35.4     25     40
GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:InterPro.
48O54929    404   WSB2_MOUSE WD repeat and SOCS box-containing ...1840.84     35.4     21     41
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
49Q9NYS7    404   WSB2_HUMAN WD repeat and SOCS box-containing ...1830.68     35.8     21     40
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
50Q0V8J1    406   WSB2_BOVIN WD repeat and SOCS box-containing ...1830.82     35.4     21     40
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
51Q9CAA0    920   COB21_ARATH Coatomer subunit beta'-1 OS=Arabi...1200.052     39.7     25     42GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
52Q2HJH6    358   SNR40_BOVIN U5 small nuclear ribonucleoprotei...1410.56     35.8     21     39GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
53Q6PE01    358   SNR40_MOUSE U5 small nuclear ribonucleoprotei...1410.45     36.2     21     39
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
54Q5SQM0    1958   EMAL6_MOUSE Echinoderm microtubule-associated...2010.067     39.7     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
55Q0ULF5    1256   SEC31_PHANO Protein transport protein SEC31 O...3010.067     39.3     23     37GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
56Q9Y7K5    426   YGI3_SCHPO Uncharacterized WD repeat-containi...490.069     38.9     37     61GO:0005829; C:cytosol; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
57Q5FWQ6    415   WDR69_XENLA Outer row dynein assembly protein...750.069     38.9     33     47GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
58Q8N136    415   WDR69_HUMAN Outer row dynein assembly protein...750.07     38.9     31     45GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
59Q5BE22    452   PRP46_EMENI Pre-mRNA-splicing factor prp46 OS...1660.073     38.9     21     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
60Q5R650    495   WDR37_PONAB WD repeat-containing protein 37 O...2810.073     38.9     21     36
61Q29RQ3    608   DC1I1_BOVIN Cytoplasmic dynein 1 intermediate...2950.076     38.9     22     34GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005868; C:cytoplasmic dynein complex; IDA:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.::GO:0031982; C:vesicle; ISS:UniProtKB.
GO:0003774; F:motor activity; IEA:UniProtKB-KW.
GO:0006810; P:transport; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 197 31 - 60
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::