Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YIR012W
Length:
431
Number of sequences:
5887
Description:
YIR012W SQT1 SGDID:S000001451, Chr IX from 378486-379781, Genome Release 64-1-1, Verified ORF, "Essential protein involved in a late step of 60S ribosomal subunit assembly or modification; contains multiple WD repeats; interacts with Qsr1p in a two-hybrid assay"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P35184    431   SQT1_YEAST Ribosome assembly protein SQT1 OS=...4310     889     100     100GO:0022626; C:cytosolic ribosome; IDA:SGD.
GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.
2O13982    399   YEC8_SCHPO Uncharacterized WD repeat-containi...4384e-28     117     26     47GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0000027; P:ribosomal large subunit assembly; ISS:PomBase.
3Q7YR70    435   AAMP_CANFA Angio-associated migratory cell pr...3750.0000000004     64.7     23     40GO:0009986; C:cell surface; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0001525; P:angiogenesis; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0010595; P:positive regulation of endothelial cell migration; ISS:UniProtKB.::GO:0014909; P:smooth muscle cell migration; ISS:UniProtKB.
4Q3SZK1    434   AAMP_BOVIN Angio-associated migratory cell pr...3750.0000000004     64.7     23     40GO:0009986; C:cell surface; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0001525; P:angiogenesis; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0045766; P:positive regulation of angiogenesis; NAS:UniProtKB.::GO:0010595; P:positive regulation of endothelial cell migration; IMP:UniProtKB.::GO:0014909; P:smooth muscle cell migration; ISS:UniProtKB.
5Q5RCG7    434   AAMP_PONAB Angio-associated migratory cell pr...3750.0000000009     63.9     23     40GO:0009986; C:cell surface; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0001525; P:angiogenesis; IEA:UniProtKB-KW.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0010595; P:positive regulation of endothelial cell migration; ISS:UniProtKB.::GO:0014909; P:smooth muscle cell migration; ISS:UniProtKB.
6Q13685    434   AAMP_HUMAN Angio-associated migratory cell pr...3750.000000003     62     23     40GO:0009986; C:cell surface; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0008201; F:heparin binding; TAS:ProtInc.
GO:0001525; P:angiogenesis; NAS:UniProtKB.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0010595; P:positive regulation of endothelial cell migration; ISS:UniProtKB.::GO:0014909; P:smooth muscle cell migration; IEP:UniProtKB.
7Q5RAC9    607   A16L1_PONAB Autophagy-related protein 16-1 OS...780.00002     50.4     33     47GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
8Q676U5    607   A16L1_HUMAN Autophagy-related protein 16-1 OS...780.00002     50.4     33     47GO:0005776; C:autophagic vacuole; ISS:UniProtKB.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000045; P:autophagic vacuole assembly; NAS:UniProtKB.::GO:0051260; P:protein homooligomerization; NAS:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
9P74442    1191   Y143_SYNY3 Uncharacterized WD repeat-containi...3360.00006     49.3     21     42
10Q75C26    328   CIAO1_ASHGO Probable cytosolic iron-sulfur pr...2370.0001     47.8     20     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
11Q8C0J2    607   A16L1_MOUSE Autophagy-related protein 16-1 OS...670.0002     47.4     34     48GO:0000421; C:autophagic vacuole membrane; IDA:MGI.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0000045; P:autophagic vacuole assembly; TAS:MGI.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
12A6ZYM0    330   CIAO1_YEAS7 Probable cytosolic iron-sulfur pr...2380.0002     46.6     20     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
13Q05583    330   CIAO1_YEAST Cytosolic iron-sulfur protein ass...2380.0003     46.2     20     42GO:0005829; C:cytosol; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016226; P:iron-sulfur cluster assembly; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0002098; P:tRNA wobble uridine modification; IMP:SGD.
14Q0P593    415   WDR69_BOVIN Outer row dynein assembly protein...990.0003     46.6     30     41GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
15Q5RFF8    485   NLE1_PONAB Notchless protein homolog 1 OS=Pon...2030.0005     45.8     22     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
16Q9NVX2    485   NLE1_HUMAN Notchless protein homolog 1 OS=Hom...2030.0005     45.8     22     40GO:0005730; C:nucleolus; IDA:HPA.
17Q5I0B9    622   ATG16_XENTR Autophagy-related protein 16 OS=X...780.0008     45.4     32     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
18Q55DA2    333   CIAO1_DICDI Probable cytosolic iron-sulfur pr...1262.1     34.3     21     37
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
19Q58D20    485   NLE1_BOVIN Notchless protein homolog 1 OS=Bos...2030.002     43.9     21     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
20Q6CBI8    332   CIAO1_YARLI Probable cytosolic iron-sulfur pr...2520.015     40.8     21     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
21Q8L828    909   COB23_ARATH Coatomer subunit beta'-3 OS=Arabi...1200.004     43.1     26     43GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
22Q9FLX9    473   NLE1_ARATH Notchless protein homolog OS=Arabi...2100.004     42.7     24     42GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
23Q8VEJ4    485   NLE1_MOUSE Notchless protein homolog 1 OS=Mus...2030.005     42.7     22     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0001826; P:inner cell mass cell differentiation; IMP:MGI.::GO:0007219; P:Notch signaling pathway; IDA:MGI.
24Q5VQ78    907   COB21_ORYSJ Coatomer subunit beta'-1 OS=Oryza...371.8     34.7     35     51GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
25Q96WV5    1207   COPA_SCHPO Putative coatomer subunit alpha OS...690.022     40.8     32     49GO:0030126; C:COPI vesicle coat; ISS:PomBase.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; ISS:PomBase.
26Q8YTC2    1258   Y2800_NOSS1 Uncharacterized WD repeat-contain...2112.8     34.3     23     35
GO:0043531; F:ADP binding; IEA:InterPro.
GO:0006952; P:defense response; IEA:InterPro.
27Q5A7Q3    389   PRP46_CANAL Pre-mRNA-splicing factor PRP46 OS...1190.006     42.4     24     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
28Q8NAA4    619   A16L2_HUMAN Autophagy-related protein 16-2 OS...670.009     42     36     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
29Q9C827    926   COB22_ARATH Coatomer subunit beta'-2 OS=Arabi...1200.009     42     25     43GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
30P49695    742   PKWA_THECU Probable serine/threonine-protein ...620.68     36.2     32     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
31Q6KAU8    623   A16L2_MOUSE Autophagy-related protein 16-2 OS...670.012     41.6     36     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
records
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