rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
451 | P48809 | 421 | RB27C_DROME Heterogeneous nuclear ribonucleop... | 73 | 0.05 | 38.1 | 25 | 53 | GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005654; C:nucleoplasm; IDA:FlyBase.::GO:0043234; C:protein complex; IPI:FlyBase.::GO:0030529; C:ribonucleoprotein complex; IDA:FlyBase. | | | | | | | | | | GO:0003730; F:mRNA 3'-UTR binding; IDA:FlyBase.::GO:0048027; F:mRNA 5'-UTR binding; NAS:FlyBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:FlyBase.::GO:0003697; F:single-stranded DNA binding; IDA:FlyBase. | | | | | | | | | | GO:0007411; P:axon guidance; IMP:FlyBase.::GO:0007298; P:border follicle cell migration; IMP:FlyBase.::GO:0007319; P:negative regulation of oskar mRNA translation; TAS:FlyBase.::GO:0045451; P:pole plasm oskar mRNA localization; IMP:FlyBase.::GO:0045727; P:positive regulation of translation; IDA:FlyBase.::GO:0048024; P:regulation of nuclear mRNA splicing, via spliceosome; IMP:FlyBase. | 452 | Q7SXP4 | 257 | SRS1A_DANRE Serine/arginine-rich splicing fac... | 77 | 0.007 | 40.4 | 34 | 53 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 453 | Q5ZML3 | 257 | SRSF1_CHICK Serine/arginine-rich splicing fac... | 57 | 0.008 | 40.4 | 40 | 58 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 454 | Q9R0U0 | 262 | SRS10_MOUSE Serine/arginine-rich splicing fac... | 73 | 0.008 | 40.4 | 30 | 49 | GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB.::GO:0051082; F:unfolded protein binding; NAS:UniProtKB. | | | | | | | | | | GO:0016482; P:cytoplasmic transport; IDA:UniProtKB.::GO:0006406; P:mRNA export from nucleus; NAS:UniProtKB.::GO:0006376; P:mRNA splice site selection; ISS:UniProtKB.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; NAS:UniProtKB. | 455 | O75494 | 262 | SRS10_HUMAN Serine/arginine-rich splicing fac... | 73 | 0.008 | 40.4 | 30 | 49 | GO:0005737; C:cytoplasm; NAS:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB.::GO:0050733; F:RS domain binding; NAS:UniProtKB.::GO:0051082; F:unfolded protein binding; NAS:UniProtKB. | | | | | | | | | | GO:0000244; P:assembly of spliceosomal tri-snRNP; NAS:UniProtKB.::GO:0016482; P:cytoplasmic transport; IDA:UniProtKB.::GO:0006406; P:mRNA export from nucleus; NAS:UniProtKB.::GO:0006376; P:mRNA splice site selection; IDA:UniProtKB.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; NAS:UniProtKB. | 456 | P51991 | 378 | ROA3_HUMAN Heterogeneous nuclear ribonucleopr... | 86 | 0.009 | 40.4 | 22 | 51 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:ProtInc. | | | | | | | | | | GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB. | 457 | Q6URK4 | 379 | ROA3_RAT Heterogeneous nuclear ribonucleoprot... | 86 | 0.009 | 40.4 | 22 | 51 | GO:0005737; C:cytoplasm; IDA:RGD.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; IDA:RGD.::GO:0043005; C:neuron projection; IDA:RGD.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0003729; F:mRNA binding; IMP:RGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0051033; F:RNA transmembrane transporter activity; IMP:RGD. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IMP:RGD.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 458 | Q8BG05 | 379 | ROA3_MOUSE Heterogeneous nuclear ribonucleopr... | 86 | 0.009 | 40.4 | 22 | 51 | | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 459 | P26368 | 475 | U2AF2_HUMAN Splicing factor U2AF 65 kDa subun... | 77 | 0.008 | 40.8 | 29 | 52 | GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005681; C:spliceosomal complex; IDA:HGNC. | | | | | | | | | | GO:0019899; F:enzyme binding; IPI:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:HGNC.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 460 | P78814 | 365 | SRP2_SCHPO Pre-mRNA-splicing factor srp2 OS=S... | 72 | 0.008 | 40.4 | 33 | 44 | GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008143; F:poly(A) RNA binding; ISS:PomBase.::GO:0046982; F:protein heterodimerization activity; IPI:PomBase. | | | | | | | | | | GO:0006406; P:mRNA export from nucleus; ISS:PomBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 461 | Q8CGC6 | 750 | RBM28_MOUSE RNA-binding protein 28 OS=Mus mus... | 59 | 0.008 | 40.8 | 25 | 58 | GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 462 | Q9ZR40 | 573 | U2A2B_NICPL Splicing factor U2af large subuni... | 84 | 0.008 | 40.8 | 32 | 49 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 463 | Q10422 | 297 | YDC1_SCHPO Uncharacterized RNA-binding protei... | 161 | 0.008 | 40.4 | 20 | 45 | GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 464 | A8Y1R8 | 157 | NCBP2_CAEBR Nuclear cap-binding protein subun... | 61 | 0.008 | 39.3 | 30 | 57 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 465 | P26369 | 475 | U2AF2_MOUSE Splicing factor U2AF 65 kDa subun... | 77 | 0.008 | 40.8 | 29 | 52 | GO:0016607; C:nuclear speck; TAS:UniProtKB. | | | | | | | | | | GO:0070742; F:C2H2 zinc finger domain binding; IPI:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0008380; P:RNA splicing; IDA:UniProtKB. | 466 | Q6MFP4 | 297 | EIF3G_NEUCR Eukaryotic translation initiation... | 51 | 0.008 | 40.4 | 31 | 59 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 467 | Q6C747 | 294 | EIF3G_YARLI Eukaryotic translation initiation... | 66 | 0.009 | 40.4 | 26 | 55 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 468 | Q9UBK2 | 798 | PRGC1_HUMAN Peroxisome proliferator-activated... | 113 | 0.009 | 40.8 | 27 | 48 | GO:0005665; C:DNA-directed RNA polymerase II, core complex; TAS:UniProtKB. | | | | | | | | | | GO:0050681; F:androgen receptor binding; NAS:UniProtKB.::GO:0003677; F:DNA binding; TAS:UniProtKB.::GO:0016922; F:ligand-dependent nuclear receptor binding; IPI:UniProtKB.::GO:0030374; F:ligand-dependent nuclear receptor transcription coactivator activity; IDA:BHF-UCL.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; TAS:UniProtKB.::GO:0001104; F:RNA polymerase II transcription cofactor activity; TAS:UniProtKB.::GO:0008134; F:transcription factor binding; TAS:UniProtKB. | | | | | | | | | | GO:0030521; P:androgen receptor signaling pathway; NAS:UniProtKB.::GO:0050873; P:brown fat cell differentiation; TAS:UniProtKB.::GO:0001678; P:cellular glucose homeostasis; NAS:UniProtKB.::GO:0007586; P:digestion; TAS:UniProtKB.::GO:0019395; P:fatty acid oxidation; NAS:UniProtKB.::GO:0006094; P:gluconeogenesis; NAS:UniProtKB.::GO:0007005; P:mitochondrion organization; NAS:UniProtKB.::GO:0006397; P:mRNA processing; TAS:UniProtKB.::GO:0070997; P:neuron death; IDA:UniProtKB.::GO:0046321; P:positive regulation of fatty acid oxidation; TAS:UniProtKB.::GO:0045722; P:positive regulation of gluconeogenesis; TAS:UniProtKB.::GO:0035066; P:positive regulation of histone acetylation; TAS:UniProtKB.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IDA:BHF-UCL.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:BHF-UCL.::GO:0006461; P:protein complex assembly; TAS:UniProtKB.::GO:0050821; P:protein stabilization; TAS:UniProtKB.::GO:0014850; P:response to muscle activity; ISS:BHF-UCL.::GO:0042594; P:response to starvation; NAS:UniProtKB.::GO:0008380; P:RNA splicing; TAS:UniProtKB.::GO:0001659; P:temperature homeostasis; TAS:UniProtKB.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:UniProtKB. | 469 | Q5R7H2 | 248 | SRSF1_PONAB Serine/arginine-rich splicing fac... | 57 | 0.009 | 40 | 40 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:UniProtKB. | 470 | Q3YLA6 | 248 | SRSF1_PIG Serine/arginine-rich splicing facto... | 57 | 0.009 | 40 | 40 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:UniProtKB. | 471 | Q6PDM2 | 248 | SRSF1_MOUSE Serine/arginine-rich splicing fac... | 57 | 0.009 | 40 | 40 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0050733; F:RS domain binding; IPI:MGI. | | | | | | | | | | GO:0001701; P:in utero embryonic development; IMP:MGI.::GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:UniProtKB. | 472 | Q07955 | 248 | SRSF1_HUMAN Serine/arginine-rich splicing fac... | 57 | 0.009 | 40 | 40 | 58 | GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IDA:UniProtKB. | | | | | | | | | | GO:0031124; P:mRNA 3'-end processing; TAS:Reactome.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0000395; P:nuclear mRNA 5'-splice site recognition; IDA:UniProtKB.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome. | 473 | Q0VCY7 | 248 | SRSF1_BOVIN Serine/arginine-rich splicing fac... | 57 | 0.009 | 40 | 40 | 58 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB. | | | | | | | | | | GO:0000395; P:nuclear mRNA 5'-splice site recognition; ISS:UniProtKB. | 474 | Q5AJS6 | 841 | MRD1_CANAL Multiple RNA-binding domain-contai... | 87 | 0.009 | 40.8 | 29 | 51 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006364; P:rRNA processing; IEA:UniProtKB-KW. | 475 | Q6DII2 | 267 | SRSF1_XENTR Serine/arginine-rich splicing fac... | 77 | 0.009 | 40 | 35 | 55 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. | 476 | Q9QYK2 | 796 | PRGC1_RAT Peroxisome proliferator-activated r... | 113 | 0.009 | 40.8 | 27 | 48 | GO:0005829; C:cytosol; IDA:RGD.::GO:0005634; C:nucleus; IDA:RGD. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0007005; P:mitochondrion organization; IMP:RGD.::GO:0070997; P:neuron death; ISS:UniProtKB.::GO:0046321; P:positive regulation of fatty acid oxidation; IMP:RGD.::GO:0045722; P:positive regulation of gluconeogenesis; TAS:RGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 477 | Q641B2 | 308 | EI3GB_XENLA Eukaryotic translation initiation... | 66 | 0.01 | 40 | 33 | 52 | GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW. | | | | | | | | | | | 478 | Q6XE24 | 437 | RBMS3_HUMAN RNA-binding motif, single-strande... | 71 | 0.01 | 40.4 | 30 | 55 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 479 | Q8WXF0 | 261 | SRS12_HUMAN Serine/arginine-rich splicing fac... | 73 | 0.01 | 40 | 30 | 49 | GO:0005654; C:nucleoplasm; ISS:UniProtKB. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB.::GO:0050733; F:RS domain binding; NAS:UniProtKB.::GO:0051082; F:unfolded protein binding; NAS:UniProtKB. | | | | | | | | | | GO:0000244; P:assembly of spliceosomal tri-snRNP; NAS:UniProtKB.::GO:0016482; P:cytoplasmic transport; ISS:UniProtKB.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000395; P:nuclear mRNA 5'-splice site recognition; IDA:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IDA:UniProtKB. | 480 | P51989 | 346 | RO21_XENLA Heterogeneous nuclear ribonucleopr... | 86 | 0.21 | 36.2 | 20 | 50 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | | 481 | Q93594 | 154 | NCBP2_CAEEL Nuclear cap-binding protein subun... | 61 | 0.01 | 39.3 | 30 | 57 | GO:0005635; C:nuclear envelope; IDA:WormBase. | | | | | | | | | | GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0016477; P:cell migration; IMP:WormBase.::GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040022; P:feminization of hermaphroditic germ-line; IMP:WormBase.::GO:0007281; P:germ cell development; IMP:WormBase.::GO:0008406; P:gonad development; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0042127; P:regulation of cell proliferation; IMP:WormBase.::GO:0040020; P:regulation of meiosis; IMP:WormBase.::GO:0016246; P:RNA interference; IMP:WormBase.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW. |